Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2221 ATGGTAAATATCCGTAATCCATTCCTACAGATTCCCACAAATAAAAGCACATTCCAAAATCCCAATCATATCCTAATCTTGGGTAGCGTACTGGGTAGTGGTCTTTTGTCAACGCTCTTCCAGTTTCGAGTGTTCAAAGTTTTAAGTgacacacaacaacaatcaacaccaCAGGTCAAAGTCCTTACCTTTTCTCTCCAAATTCAGATTCTCTTCATGGATTACCTGGAGAAGTTGAAAATTTGGACGAAAAAAGCAGAGAAAGAAGGTGAAGGTCCTCCTGTGTTGTGGTTCGAAACCTCTGTCTCTGTTTGTCGCCGCTTCCAGTTTGAACCCCATGGCCAACTTTCCGTAACGGTTGTTGGTGATTCTAGACCATTATACCACAGGATAGTTGAGTCTTTCCAGAATAAGTTTTTCCCTTCAGGATATCCATACAGTGTGAATGAAGGTTACCTCAGATACACACAGTTTCGAGCACTGCAACACACTGCCAGTGCAGCGCTATCAGTGTTATCAACTCAGTCACTGCTATTTGCTGCAGGATTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGTATGCAACATTTAGGCAATCTAATATGTAGCAATTTGGGTGCAAGAATGGATTCTGAGCCTAAAAGTTGGAGAATTTTAGCTGATGTGCTCTATGATTTAGGCACTGGTTTGGAAGTGCTTTCTCCTTTATGTCCACAGCTTTTTCTTGAAATGGCAGGCCTAGGCAATTTTGCCAAGGGGATGgcagttgttgcatcaagagcTACAAGATTGCCTATTTATTCTTCGTTTGCTAAAGAAGGAAATCTAAGTGACCTATTTGCTAGAGGAGAGGCTATTTCCACTCTCTTTAATGTTGTTGGAATTGGAGTTGGAATTCAATTAGCATCTACTGTATGTGCGTCAATGCAGGGAaagttgGTTGTGGGATCTCTACTATCTATTATACACATATACAGCGTTTCTGAAGAAATGAGAGCAACTCCTGTCAATACCTTGAATCCACAAAGAACTGCAATGATTGTGGCTGATTTTCTCAAGGCTGGAAATGTATCAAGCCCAGCTGATCTAAGATATCAAGAAGATTTGCTATTTCCTGGGAGACTTGTAGAAGAGGCTGGAAACGTAAGAGTAGGTAGGGCTTTGCACAAGGTTATTAAGCCTTCAAGGCTTCTTGAATTAAAACAAGTATTCCCTGGGGAGAAGTTTCTTTTAAATGGTGATAATAGGTGCATGGACATGGTATTGGAGCAAGATGCTATTGGCGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGTACAAATTAACAAGTCCTCTCATGAGCTCAGTACCAGTGCCCTGCTACAGGCCTatgagaaaatgaatgaggTCTTCCCTgtgtttttaaaagaattacaGTGCAAAGGGTGGCATACAGATCGTTTTCTGGATGGAAGTGGGAGCCGCTTTGCATTGTAG 1506 0.3991 MVNIRNPFLQIPTNKSTFQNPNHILILGSVLGSGLLSTLFQFRVFKVLSDTQQQSTPQVKVLTFSLQIQILFMDYLEKLKIWTKKAEKEGEGPPVLWFETSVSVCRRFQFEPHGQLSVTVVGDSRPLYHRIVESFQNKFFPSGYPYSVNEGYLRYTQFRALQHTASAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHLGNLICSNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPQLFLEMAGLGNFAKGMAVVASRATRLPIYSSFAKEGNLSDLFARGEAISTLFNVVGIGVGIQLASTVCASMQGKLVVGSLLSIIHIYSVSEEMRATPVNTLNPQRTAMIVADFLKAGNVSSPADLRYQEDLLFPGRLVEEAGNVRVGRALHKVIKPSRLLELKQVFPGEKFLLNGDNRCMDMVLEQDAIGEDALRGWLVAAYAVQINKSSHELSTSALLQAYEKMNEVFPVFLKELQCKGWHTDRFLDGSGSRFAL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2221 501 Pfam Vitamin B6 photo-protection and homoeostasis 130 361 IPR006968 -
Ssu7g2221 501 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 73 500 - -
Ssu7g2221 501 PANTHER RUS1 FAMILY PROTEIN C16ORF58 73 500 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2221 Ssu-Chr7 43819695 43823440 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2221 - - gmx:100814176 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2221 7 43819695 43823440 Ssu7g2221 7 43819695 43823440 ECH
Ssu4g1232 4 19609245 19613007 Ssu7g2221 7 43819695 43823440 PCT