Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2213 ATGTTTAACAGGCCAAGAGATGCTAGCGCTTTCAATGTATTCAATTGGAAACGTCAAGGTGAATCATCTGTGACAACAGGTTTACTTCGGGATGTTCCTCCAGAGATTGAATTGTCGGATTATAGGAGGATCCCAAGTCCAGGTAGCGAGAGCCCTTCGGGCCTACTTAATGGTGAGAGCCTGAATGTAGAACCCATTGCTGATTTGGATCTCTTCTTCGAAAGGCTTTACGGCTACTATTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATTGTTGAACTTCTGAGTCTTGGGTTCACCATATGTTTTTCAGGATTTTTCTTACTATATGTGGACTGGAATGGGCTCCAAAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAAGGAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAGCACCCTTTAACTCCATTAACAATTAGCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTAAAGGATACTTTGGAAATCCGACACTTTTACTACAATAGTCTCTGTGTTACTGATAATGAAATTCAAACCATGCCCTGGGCTACAATTCTTGAAAAGGTTGTCCTTTTGCAAAGCTCACAACAACTCTGTGTGGTAAAGGACCTTTCTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAGGGTGTGCTTGCTTTCCCCATTTCACAGTGGGTCCCAGGTGCTGGACCAACAGTGAAATCTGGTACTAATGGAATGCAATATCGTCTAATACTACCCAAGACCCTTGAGTGGACTTTAAACTGGTGCATTCTGCAAAGCATGTTTGATCGAAACTTCTGTGTCAGAAGGGATTTTGTGTCAAATCCAAAGACATTAAAGAAAAGGCTTATGGTAGTTGGGATTGCAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCATGCAGAGCAATTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCACGATGGGTCTTTAGGGAATTCAACGAgGTGGACCATCTCTTCAAGCATCGGATTAATAGCAGTGTTTTACATGCTTCTAACTATCTCAAGCAATTTCCTTCACCTTTCATATCTATCATTGCAAAATTCATCTCATTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTAGAGGAATCTCTGCTGGAGGGTCATATATTTGGTCGGAACTTGTTGTGGTATGCTGCTGTTTTTGGAGCTATAACTGCTATTAAACGGGCTGCAATTACAGATGAGCTTCTAGTCTTAGACCATGAAGGAGCAATGTCAATGGTAGTTCAGCATACACATTATATGCCCAAGAGATGGCGGGGCAAAGAAAGTACTGAAATGGTCCGGATTGAGTTTGAAACCTTATTCCAGTATAGTGGGATGATGTTACTTGAGGAGATGGCTTCAATTTTCCTTACTCCATACTTACTTCTGTTGGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTTATTGCAGATTTTACTGTGGATGTTGAAGGTGTTGGTCATGTTTGCAGTTTTAGCGTCTTTAATTTTCAAGAGCATGGAAACAGTAATTATGGCTCTCCATTTAATGCGCCTCGCAGCCAGAGAAGTTCCCAGGGGAAATTGGAGAAATCATTTTTGAGCTTTCAGAGTAGTTACCCTTCATGGGAACCAAATGCTCATGGGAAGCAGTTTCTGCTAAATCTGAGAACATTCAGAGACCAAAAATTAGCAGGACATGTAAACAGACATGGATTTTCCCCTCTCAGACTGTGGAGAGGCAGTCCCAACATGGGAAGCAATGGAGACAGAAACAGGTTTATGTCCAGGGAAATACCATATAGTACTTTTGTGACGGGCAATCACTTGGGTTCATTGTGGCTAATTGAATCCAATAATCAAAACAATCATCCCTATCTCCTTGATTGGTACTATACTTCCCAACCTCATGATGCAAGACATGTTCCAGCAGATCCATTTGAAGTAACTGAGCATCATTCCCCAGATTGGATGCCCTCCAACTTGGTACAAAATGAACATGAGTATGAAGAATACATAAATGAGTATTGTGATGAATGTGCTCCTGCTTCCCACCTCGGGGCTTCCACATCAGCTCCCATCTTCAGGGATAGCCTAATTCAGGATCAACATTCCATTGATGTGCCCCACACTAGCAGGAGTCATTGGTGGGCTAGAAGTCACCCCAGGAGTGGACAAGGTCAGACAAGCTTTTTTGAGCCACCAGATTTCAATCACCAAACAGCATACAATTACCATGATAAATTTTCTGATAGAGGGTCAGAGGATCAAGATCAGGAACAACACTTGTACTGGAGAGATTATCACAAATTATCTAGTACAGCACACGCAGATGATTTAGATGCAGTAGAATTCAATCTTCATTTTGATGATGTTTATAGCAGGCCTCCAGAAAATCCCACTGTAAATCCAAACACTGCAAGCTTTTGA 2592 0.4147 MFNRPRDASAFNVFNWKRQGESSVTTGLLRDVPPEIELSDYRRIPSPGSESPSGLLNGESLNVEPIADLDLFFERLYGYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLQNAKCGMDAVESGRKPCDLAKEALHQHPLTPLTISKAIIVGYLGIFSIYWIFCFLRFFVQLKDTLEIRHFYYNSLCVTDNEIQTMPWATILEKVVLLQSSQQLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVKSGTNGMQYRLILPKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLKKRLMVVGIAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWVFREFNEVDHLFKHRINSSVLHASNYLKQFPSPFISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLLWYAAVFGAITAIKRAAITDELLVLDHEGAMSMVVQHTHYMPKRWRGKESTEMVRIEFETLFQYSGMMLLEEMASIFLTPYLLLLVVPKRVDDILQFIADFTVDVEGVGHVCSFSVFNFQEHGNSNYGSPFNAPRSQRSSQGKLEKSFLSFQSSYPSWEPNAHGKQFLLNLRTFRDQKLAGHVNRHGFSPLRLWRGSPNMGSNGDRNRFMSREIPYSTFVTGNHLGSLWLIESNNQNNHPYLLDWYYTSQPHDARHVPADPFEVTEHHSPDWMPSNLVQNEHEYEEYINEYCDECAPASHLGASTSAPIFRDSLIQDQHSIDVPHTSRSHWWARSHPRSGQGQTSFFEPPDFNHQTAYNYHDKFSDRGSEDQDQEQHLYWRDYHKLSSTAHADDLDAVEFNLHFDDVYSRPPENPTVNPNTASF 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2213 863 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Ssu7g2213 863 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 855 - -
Ssu7g2213 863 PANTHER APG9 AUTOPHAGY 9 1 855 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2213 Ssu-Chr7 43433751 43439250 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2213 K17907 - gmx:100779344 1563.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2213 7 43433751 43439250 Ssu7g2213 7 43433751 43439250 ECH
Ssu4g1240 4 19872959 19878801 Ssu7g2213 7 43433751 43439250 PCT