Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2182 ATGTCTTCCATTAACCCCTTACCCCCTTCCCCTCATTACAGGTCCATCCCTTCCACCTCCGCCACCGTCCCTCGCGCCGCCGCTCCCTCCGGCTTCCCCACTCGCCGGCCGTGGGAGGAGGTTTTCGCTCTCCACTCGTTCACGCGCCCCTACTCCCTCGGCGAAGCCGGGCTCCGCATGAGGCGCAACCTGGGCCACTTCCGCGTGAACTACGCCATGATCGCGCTCTTCGTGCTGTTCATCAGCCTCCTCTGGCACCCAGTCTCCCTCATCGTGTTCCTCGCCGTCTTCGCCGCGTGGTTCTTCCTCTACTTCTTCCGCGACGGCCCCGTCGTCGTGCTCCGCCGCGCCCTCGACGACCGCCTCGTCATGGCCGCGCTCGCCGCCGTCACCGTCGCGGCGCTCGTCCTCACCGGCGTCTGGCTGAACGTGGTGGTTTCGCTAATCGTTGCGGTGGCGGTGGTGGCGTTGCATGCGGCGTTTCGGAGCACCGAGGATTTGTACGTGGACGAATTGGAAGTTTCCGATGGGGGTTTGGTTTCGGTTGTTGGGGGTAGCCCTACTATGCGAACAGGGTACACTAGAGTATAG 591 0.6396 MSSINPLPPSPHYRSIPSTSATVPRAAAPSGFPTRRPWEEVFALHSFTRPYSLGEAGLRMRRNLGHFRVNYAMIALFVLFISLLWHPVSLIVFLAVFAAWFFLYFFRDGPVVVLRRALDDRLVMAALAAVTVAALVLTGVWLNVVVSLIVAVAVVALHAAFRSTEDLYVDELEVSDGGLVSVVGGSPTMRTGYTRV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2182 196 PANTHER PRA1 FAMILY PROTEIN 13 194 - -
Ssu7g2182 196 MobiDBLite consensus disorder prediction 1 25 - -
Ssu7g2182 196 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 13 194 IPR004895 -
Ssu7g2182 196 Pfam PRA1 family protein 32 171 IPR004895 -
Ssu7g2182 196 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2182 Ssu-Chr7 42808382 42808972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2182 - K20359 gmx:100815700 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2182 7 42808382 42808972 Ssu7g2182 7 42808382 42808972 ECH
Ssu4g1261 4 20526952 20527398 Ssu7g2182 7 42808382 42808972 PCT