Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1261 ATGTCGTCGCCGTCTTCTTCAGCGCCCCATTACAGCTCCCTCCCCTCGCCCTCATCCTCCACCTCCACGGGCCCCTACTTCGTCACGCGCGCCGCAACCGCCGCGCGGACCTCGTTTGCGACGCGCCGGCCGTGGGAAGAAGTCTTCGCCCTCTACTCGTTCACGCGCCCCTACTCGCTTGGGGAAGCGACGATGCGCGTGAGGCGCAACCTCAACCACTTCCGCGTGAACTACCTCATGATGGTGCTCTTCATCCTGTTCCTGAGCCTCCTCTGGCACCCGGTCTCGATCATCGTGTTCCTGGTGGCGCTCGTGGCGTGGTTCTTCCTCTACTTCTTCCGGGACGGGCCGGTGGTGCTGTTCGGCACCGCGTTGGACGACAGGGCCGTGGCGGCGGCGCTTGCGGCGGCGACCGTCGTGGCTTGGTGCTCACCGGCGTGTGGCTGA 447 0.6622 MSSPSSSAPHYSSLPSPSSSTSTGPYFVTRAATAARTSFATRRPWEEVFALYSFTRPYSLGEATMRVRRNLNHFRVNYLMMVLFILFLSLLWHPVSIIVFLVALVAWFFLYFFRDGPVVLFGTALDDRAVAAALAAATVVAWCSPACG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1261 148 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 17 141 IPR004895 -
Ssu4g1261 148 MobiDBLite consensus disorder prediction 1 23 - -
Ssu4g1261 148 Pfam PRA1 family protein 38 143 IPR004895 -
Ssu4g1261 148 PANTHER PRA1 FAMILY PROTEIN 17 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1261 Ssu-Chr4 20526952 20527398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1261 K20359 - gmx:100816074 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1261 4 20526952 20527398 Ssu7g2182 7 42808382 42808972 PCT