Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2166 ATGCCTTTTCCGATGAAAATTCAGCCAATCGATTCTCAGGTACCTTCCGAGGGGACTCGGCTTGAGCTGGCCAAGCCGGCTGTGAAGTCGAGGCTAAAGCGGCTCCTCGAGCGCCAGTTCCTCGGCGTGCTGAGAAATTCGGCTCCAGAAAAGATCGGCGGCGGCGAGGAACCGCATTTGTGCAAGGATGCCGTCAACGTCAACGGCTGCAGTGATTTCGAACCTAGCTCGGCGTGTTTGGCAAAAATGGTGCAGAATTTCATCGAGGAGAGTCACGAGAAGTACTCCGCTTCACACCGCAACCGCTGTAACTGCTTCAATAGGAACTACGACAACAGCTCTGACGAAGACTCAAACTCGCTCGGCGGTTCCGGCGATTCCAATTACTCTTCCGGCGAGGCGTGTGAAGCTCTCAAGGGTCTGGTAGCGTGTGCGAGCGTGTACGAGAGGAATTTGCTCGCGGACACTGCGAAGATCGTGGAAAAGAATAAGATCTGCAAGCGCAAGGACAATTTCTGCAGAAAATTTGTCACGGACGGTTTACTAGCCCTCGGATACGATGCTTCTATTTGCAAATCTCGCTGGGAAAAATCCCCCTCTTATCCCGCcgGGGAATATGAATACATAGATGTGGTGACGGGGAAAGAGAGGATTCTAATTGACATTGACTTCAGGTCAGAATTCGAGATTGCTCGATCCACCAAGGCGTACAAGACGATTCTCCAGAACCTTCCACACACATTCGTTGGCACGTGCGATCGGTTGCAGAGCATCGTGGCCGTCGTTTCGGAGGCAGCGAAGCAGAGTCTGAAGAAGAAGGGAATGCATGTTCCGCCGTGGAGGAGAGCCGAATATGTGAAAGCGAAGTGGCTTCTCCCTTACACGCGAACTACTTCTGCGCACGGGATCGAAgaggagaagaaggaagaaCAACAGCTTTTGAAGGAAAACTCTGTCACCGCTGAGTCGGAGAGTTCCGCCGAAGACAACAAGGCGACGATCGAATGGAAGCCACCGGAGCTGAAGCCAAAGGGTTCGCTTTCTGGCGTCAAGGTCGTGACTGGTTTGGCAGTGGTCTTTCATGATGACGATAACCcataa 1101 0.515 MPFPMKIQPIDSQVPSEGTRLELAKPAVKSRLKRLLERQFLGVLRNSAPEKIGGGEEPHLCKDAVNVNGCSDFEPSSACLAKMVQNFIEESHEKYSASHRNRCNCFNRNYDNSSDEDSNSLGGSGDSNYSSGEACEALKGLVACASVYERNLLADTAKIVEKNKICKRKDNFCRKFVTDGLLALGYDASICKSRWEKSPSYPAGEYEYIDVVTGKERILIDIDFRSEFEIARSTKAYKTILQNLPHTFVGTCDRLQSIVAVVSEAAKQSLKKKGMHVPPWRRAEYVKAKWLLPYTRTTSAHGIEEEKKEEQQLLKENSVTAESESSAEDNKATIEWKPPELKPKGSLSGVKVVTGLAVVFHDDDNP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2166 366 MobiDBLite consensus disorder prediction 301 315 - -
Ssu7g2166 366 MobiDBLite consensus disorder prediction 301 347 - -
Ssu7g2166 366 Pfam PDDEXK-like family of unknown function 82 296 IPR006502 -
Ssu7g2166 366 PANTHER OS03G0796600 PROTEIN 24 366 IPR006502 -
Ssu7g2166 366 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 175 297 IPR006502 -
Ssu7g2166 366 PANTHER DUF506 FAMILY PROTEIN 24 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2166 Ssu-Chr7 42517410 42518716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2166 - - gmx:100782749 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1275 4 20768650 20769959 Ssu7g2166 7 42517410 42518716 PCT