Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2145 ATGGAACCCAAGTTCAGAATGAATTGTCGCGGAAATGAGTTCCTTCAAACCAGTGGCACTCATTTGCCAGAGAGCCCGCGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGCTCTTGAGGTCTCTAAAGCCCTGGCACCTCCACCACCTTCTTCTTGCAACATACCTTCCAAGCCTCCTAGTGCATCCTCTTGTGTGACTGACTCCATTTCCGAAGAAACTTCTGGTCAGTCAGAGGAATTCTCAACCATGTGTGGGAACCAGTTCTCTTTTGCCTCCTCTGCTACTTCGCAGCTTGTCCTTGACCGCATTATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCATTAACGTCAGGTAGACTGTCTCACAGCAGTGAACATTTGAACGGTGGTGCTTCTTTAACCGGAACAGATAGTCCTCCAGTTTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTGGGGCAAACAACTCCATTCATCCCTTATTCAATGGTGGACGAACCATGAGTGGTGCTACAGGCAATGCCACTCCTAGCTCCGGGCCTAAAACGGTTGGAAGATGGTTGAAAGacagaagagaaaagaagaaagaagaaaacagaACCCATAATGCTCAACTGCATGCTGCAATTTCTGTAGCTGCTGTGGCAGCTGCAGTTGCAGCCGTCACCGCTGCAACAGCAGCCTCATCTGCACCTAACAAGGATGAGAAGATGGCCATGGCTGTGGCTTCTGCGGCCACGTTAGTTGCTGCTCAGTGTGTAGAGGCTGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCCTCTGTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACACTTACAGCTGCAGCTGCCACAGCTCTGCGAGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAGGTGTGGAATATTACTGCAGTGACTCCACTAGAGAGAGGGATAGGGATTGGAATATGTGGTAAAGGCAATAACAGTAATTCCAGCACCAGTGATAGTGGAGAGATTATCAATGGTGAAAATTTTTTGGGTGCCTGCAGCCAAGACCTCCTTGCTAGGGGCACTGAATTACTCAAACGGACCCGTAAAGGTGATCTTCACTGGAAAATAGTTTCAGTTTATATACATCGAACAGGCcagGTGATGCTGAAAATGAAGAGCAGGCATATTGCAGGAACcattaccaaaaagaaaaagaATGTTGTGTTAGATGTGTGCACAAATTTACCAGCGTGGCCAGGGAGGCATCTGTTTGATGACGGTGAAGAAAGAAGGTATTTTGGATTGAAGACAGAAGCAAGGGGGGTTGTGGAGTTCGAATGCAGAAATCAAAGAGAATATGATATCTGGACTCAAGGGGTTTCTAGACTTCTTTCCATTGTTGCAAGGAGACATAACACAAACGGGGTATGA 1449 0.4603 MEPKFRMNCRGNEFLQTSGTHLPESPRVPMEFLSRSWSASALEVSKALAPPPPSSCNIPSKPPSASSCVTDSISEETSGQSEEFSTMCGNQFSFASSATSQLVLDRIMSQSAREEVSPLTSGRLSHSSEHLNGGASLTGTDSPPVSPSDEFDDVVKFFGANNSIHPLFNGGRTMSGATGNATPSSGPKTVGRWLKDRREKKKEENRTHNAQLHAAISVAAVAAAVAAVTAATAASSAPNKDEKMAMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNITAVTPLERGIGIGICGKGNNSNSSTSDSGEIINGENFLGACSQDLLARGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHIAGTITKKKKNVVLDVCTNLPAWPGRHLFDDGEERRYFGLKTEARGVVEFECRNQREYDIWTQGVSRLLSIVARRHNTNGV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2145 482 MobiDBLite consensus disorder prediction 60 81 - -
Ssu7g2145 482 PANTHER EXPRESSED PROTEIN 1 480 IPR040269 -
Ssu7g2145 482 MobiDBLite consensus disorder prediction 48 81 - -
Ssu7g2145 482 Pfam Plant pleckstrin homology-like region 368 473 IPR013666 -
Ssu7g2145 482 MobiDBLite consensus disorder prediction 114 145 - -
Ssu7g2145 482 PANTHER AUXIN CANALIZATION PROTEIN 1 480 - -
Ssu7g2145 482 MobiDBLite consensus disorder prediction 114 149 - -
Ssu7g2145 482 Pfam Auxin canalisation 23 325 IPR008546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2145 Ssu-Chr7 42208652 42212030 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2145 - - gmx:100782024 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2145 7 42208652 42212030 Ssu7g2145 7 42208652 42212030 ECH
Ssu4g1289 4 21075326 21078792 Ssu7g2145 7 42208652 42212030 PCT