Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2136 ATGGCCACTCTGTCTCAGGCAAACTCCAGGAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCCAAAAACTCAAAATGGCTCCAGGAAAATCTAACAGATATGGATGCCAAGGTAAAGCAAATGATCAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAgaaatgtattataaaaaacGCCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATATCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGCCATGCCCATAGGACCATGGCTGAGGCATTTCCTAATCAAGTTCCTATGATGCTGACAGATGATTTACCTGCAGTTTCTCTTCCGGAGACTGAGCTGCATACTCCAGAAATGCGCCACCCTTCACGTGCGTTTCTTGATCCAGATGAACCACAAAAGGATGCTTCTGCTCATTTCCATGCTATCAAAAAAAATGGTGCGTATACTGGTGAACCTGATTCTGCTTTGAACAAAACAGGTTTGAAACAGCTCAACGATCTCTACATCTCTGGAGAACATGAAAATCTTACAAAGTTTGCAGAAGGGCATTCTAGAAGGgtgcttaatttttttgagacgCAGGAGGAGAGTAGTGAGATAAACAATGGAAGCCATGATACTGGGTCTCAAGTCTTGTCTGAGTCTGAACGTGTGACAAAAGCTGAGACAGAAATTTTGGCCTTGAAGAAAGCCATTGCCAAattagaagatgaaaaggaagcTGGCTTGCTTCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTGGAGTTAGAAGTGTCTAGTGCACAAGAGAATTCTCAGAGACTTGATGAGCGAGCAAGTAAAGCTGAAGCTGAAGTTCAAGCCTTGAAGGAAGCCCTAGTCAAATTACAGGCTGAAAGTGAAGCTAGCCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACTAAtctggagaaaattatttcttttgcacAGAAGGAAGCAGGAGAACTTAATGAACGAGCTACTAGAGCTGAAACTGAAACCGAGTCCCTAAAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGTTACCCTTGTTCAATATAAACAGTGCTTGGAGACAATATCAAAACTGGAGGAGAGATTAGAAGAAGCCGAGAAGAATGCAAGAAAGATTAAGGAGCATGCCAATATAGCAGAAAATGAAATCGAGGCTTTGAAATTAGAAGTTACTAAACTTaatgaagaaaaggaagaagctGCTCTCCGTTATCAGCAATGCTTGGAGATAATTTCCAGTTTGGAGTATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAAGCTAAATTCCAAGATAGATGATGGGGTTGAAAAGTTACAGAATTCTGAACAGAAGTGTCTTCTCTTGGAGACATCAAATCACACTCTGCAGTCTGAATTACAGTCTTTGGCACAAAAAATGGGGTCTCAAAGTGAAGAACTTAGTGAGAAGCAGAAGGAATTGGGTAGACTTTGGGGTTGCATACAAGAGGAGAGATTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTGCAGCAGTTGCATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAACTTCACAGTAAAGTGGAAATACTGGGGAATGTGGAATCACGTAAGCAGGCTTTAGAGGGTGAAGTACACAGGGTGAGTGAGGAAAACAAAATCCTAAATGAAGTCAAAATTTCTTCATctttgtcaataaaaaatttgcaGGATGAGATTTTGAATTTGAGAGAGACAATAGAGAAACTTGAACAGGAGGTGGAGCTGCGAATTGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTaatgatttgaataaaaaacagGAAGCCATGATGGAGGAGGTTAGGTCAATTGACTTAGACCCACAGTGCTTTGGATCATCTGTGAAAAAATTGCAAGATGAGAACTTAAAGCTGAAGGAAACATGTGAGGCTAACAAAGCAGAGAAAGAAGCTCTTTTGGTAAAATTGGAAACCATGGAGAAACTTCTGGAAAAAAATACTGTTTTAGAGAATTCCCTTTCAGACTTGAATGCTGAGCTGGATAGTGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACCTGCCAATCTCTGCTAGTGGAGAAATCAAATCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAATTACAATCGACAACTGAAAAGCTGGAGAAGCTCTCGGAAAAGAGCAACCTATTGGAAAATTCCCTGTTTGATGTGAGTGCTGAACTTGAAGGGTTAAGGGTGAAGTCCAAGGTATTAGAAGACACATGCCAGTCACTTGACCATGAGAAGTCCAGTATCTTCCAAGAGAAAGAAACCTTAGTTTCACAATTGAACATAACTCATCAAACACTGAAAGATCTGGAGAAACTGCACAGTGAATTGGAATTAAAGCATTTGGAACTAAAAGGAGAAAGGGAGTCTGCACTTCAAAAGGTAGAAGAGCTACTAGTTTCCCTATATTCTGAGAGGGAAGAGCATTCcagagttttgaaattgaatgaagATGAATTGGCTGAGAAGGAATTACAAATTCATACTCTACAAGAAGATGCAAATTGCAAGAAAAAGGAATATGAGGAGGAACTGGACAGAGCTATGCATGcccaaattgaaatttttatcttGCAGAAATGTATCAACGATTTGGAGAAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTTTTGGAAGCCTCAAAAATGTCCGACCAAATGATATCTAAATTGGAGACTGAAAATGTTCAAAAGCAGGTTGATGTGAATTCTCTGTCTGAGAAAATTAAAGTACTAAGGATTGGGCTGCTTCAGGTGTTGAAGACTCTTGACATTAACAGTGAGCATTTCTGTGAAGATGTGCTTGAAGAAGACCAGATGCTTCTGAACCATATATATGGAAAACTTCAGGAGAGACAGAAATCTTTTGATACAATTTTCAATGAAAGCCAGCAAATGACCATTGAGAATTCAGTTCTGATTACATTCCTTGAGCAGTTGAAACTAAAGGTAGAAAATCTGGTGACACAAAGAGATGCCCTTGATGAGGAGTTCAGGATCCAATCTAAGCAGTTCTTGGCATTGCAAATAGAGGTCCAAAAGATATTGGAGAAGAATCAGGAGTTGAAGTTGACAATAAGCaaaggagaagagagaatgGAAGTAATGACAACTGAAATAGACAATCTACAGAAGCAACTGTCAGACTTGCAAAAGAGTCACAACAATTTACAGGAAGATAGTTGCAAGATTTTGGAAGAGAAGGAGTCCTTGATGAGAAGATTTCTAGATCTGGATGAAGAGAAAAGTAACTTGGAAGAAGAAATATGTGCCGTGATCCATGACACAATAGCTCAATCTAATATTTCCGTGATTTACCAGAACATTATCTTTGAAAAGCTCCTGGAAATTAAAGAGCTAGGTGAAGATCTTGATAAACATTGTTCAGCAAATAATGACCTTGAGGAGAGATTAAAAGTAATAGTGTGCAAATTAGAAAATGCAGAAATGGAAAATTCACATCTTAAGGAGTCATTTGTAATGTCAAATGTTGAGCTAAATTTAGTTGAATCTGTCAATGATCAATTGAGTTGTCAGATTCGGGATGAAAGGGAAATGTTGTGTCAAAAGGAAAATGAGCTTTTGGAAGCAGCCGAGATGTTTCGTGTTTTACATACTGAGAAAACAGAATTGCAAAGAATGGTAGAAGATCTGAAGTTTAGGCATGATGAAGCCAGGATGATGCTAGAAGAACAGgctaatcaaattttgaaattgtctGCAGACAAGGATCATCAAAATGAAGAGCTCATATGCCTATGTGAAGTGAATCAGAAGTTGGAGTCTGAAATGGGGTACCTACGTCAAGAGCTTGGAGAAACTAAACTGAGGGAAAAGAAGCTAAACTATGAAGTGCTTAAGGGAACAAATGAGATTGAACAATGGGAAACTCAGGCTTCAACACTCTTTGCTGAACTGCAGATTTATGCTGTCAATGAAACATTATTTGAAGGAAAGGTCTGTGAGCTAGCTGATGCATGTAAGAATCTTGAATGCAGAAACTACTCCAAAGACATGGAAAGTGAACAGCTGAAAGAAAGAGTTAACAAGCTGGAAGTTGAAAATGGAAGACTGTGTGATCAATTAGCTGCTTATGTCTCTGCTGTCAGTGCTTTGAATGATTGTATAACATCTCTGGAGATGCAGACTCTCGCACATGCAAAACTTAATGACTATGAAGAATCAAAGgttaaaaatttgaatagtGAATCCACTGAAAATGGTCCACAAACAGATGAAGATCAGACTGTTATGGCACCAGATGCACTCCCTGACTTCCATTACATGCAGAGAAGAATCAATGCAATTGCAATAACAGTTAAGCAGTTAGATGAAAGTTTCAAACCCAAGAATGAAACGAGAGAGATTCAAGAGTTAAAATCTGGAATTAGCCGGCATCAAGAGAATATTCAAGCAAGCAATCATGTTACTCAAGGGGATCAAGCAAGGCCAGATATCCCCGTTACTGAGATTGAAGTTCTGCCAAAAGACATCGTGCTTGATCAAATATCTGAATGTTCGTCTTATGGCATAAGTAGGAGGAGAGAAATTGTCAAGGCAGATGATCAGATGCTTGAGTTGTGGGAAACAGCAGATAAGGATGCCACTGATGGCCTGCAAGTTGAAAAGACACAGAAGATGGCTGCTGAAGCTGCTGGCAATCATCAAAGAGGAGCAACCAAggaacccaaaaataaatatccttCAACAGATTCCTTGGTGGAAAAGGAGTTGAGTGTGGACAAGTTAGAGATCTCAAGAAGACTGACACTGCCACGCGAAGAAGGGAACCAGAGCAAGATTTTAGAAAGACTTGATTCTGATGCACAGAAGTTGACAAACCTTCAAATCACCGTACAAGATTTGTTGAAGAAGGTAGAGATTAATGAGAAGAACACCAAGGGAAAAGGTGTTGAATATGATGAGGTGAAAGGGCAACTTGAAGCAGCTCAGGAGACTATCACAAAGTTGTTTGATGCCAACCGCAAGTTGATGAATAATGTGGAAGAGGGTACCTTGTCTTCTGTTGGGAAGGATGCAGCAGAGTCAGATGAAAGTGGAAGTGTCAGCAGAAGGACAGTTTCAGAACAGGCACGTAGAGAATCAGAAAAAATAGGACAACTGCATTTGGATGTGCAAAGACTGCAGTTTTTGCTTCTGAAACTAGGTGAAGGAAaagaaagcaaagaaaaaacaaaaatggccaATCGAAGTCCAAGAGTGCTTTTGCGAGATTATCTCTATGGTGGGACGAGAACCTACaaccaaaagaagaaaaggctACCCTTTTGTGCATGTGTGCGACCTTCCACCAAGGGAGATTGA 5475 0.3828 MATLSQANSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQVPMMLTDDLPAVSLPETELHTPEMRHPSRAFLDPDEPQKDASAHFHAIKKNGAYTGEPDSALNKTGLKQLNDLYISGEHENLTKFAEGHSRRVLNFFETQEESSEINNGSHDTGSQVLSESERVTKAETEILALKKAIAKLEDEKEAGLLQYQQSLEKLSNLELEVSSAQENSQRLDERASKAEAEVQALKEALVKLQAESEASLLQYQECLEKITNLEKIISFAQKEAGELNERATRAETETESLKQDLARVEAEKEVTLVQYKQCLETISKLEERLEEAEKNARKIKEHANIAENEIEALKLEVTKLNEEKEEAALRYQQCLEIISSLEYKLSCAEEEVRKLNSKIDDGVEKLQNSEQKCLLLETSNHTLQSELQSLAQKMGSQSEELSEKQKELGRLWGCIQEERLRFIEAETAFQTLQQLHSQSQEELRSLAAELHSKVEILGNVESRKQALEGEVHRVSEENKILNEVKISSSLSIKNLQDEILNLRETIEKLEQEVELRIDERNALQQEIYCLKEELNDLNKKQEAMMEEVRSIDLDPQCFGSSVKKLQDENLKLKETCEANKAEKEALLVKLETMEKLLEKNTVLENSLSDLNAELDSVRGKVNVLEETCQSLLVEKSNLAAEKATLFSQLQSTTEKLEKLSEKSNLLENSLFDVSAELEGLRVKSKVLEDTCQSLDHEKSSIFQEKETLVSQLNITHQTLKDLEKLHSELELKHLELKGERESALQKVEELLVSLYSEREEHSRVLKLNEDELAEKELQIHTLQEDANCKKKEYEEELDRAMHAQIEIFILQKCINDLEKKNFSLLVECQRLLEASKMSDQMISKLETENVQKQVDVNSLSEKIKVLRIGLLQVLKTLDINSEHFCEDVLEEDQMLLNHIYGKLQERQKSFDTIFNESQQMTIENSVLITFLEQLKLKVENLVTQRDALDEEFRIQSKQFLALQIEVQKILEKNQELKLTISKGEERMEVMTTEIDNLQKQLSDLQKSHNNLQEDSCKILEEKESLMRRFLDLDEEKSNLEEEICAVIHDTIAQSNISVIYQNIIFEKLLEIKELGEDLDKHCSANNDLEERLKVIVCKLENAEMENSHLKESFVMSNVELNLVESVNDQLSCQIRDEREMLCQKENELLEAAEMFRVLHTEKTELQRMVEDLKFRHDEARMMLEEQANQILKLSADKDHQNEELICLCEVNQKLESEMGYLRQELGETKLREKKLNYEVLKGTNEIEQWETQASTLFAELQIYAVNETLFEGKVCELADACKNLECRNYSKDMESEQLKERVNKLEVENGRLCDQLAAYVSAVSALNDCITSLEMQTLAHAKLNDYEESKVKNLNSESTENGPQTDEDQTVMAPDALPDFHYMQRRINAIAITVKQLDESFKPKNETREIQELKSGISRHQENIQASNHVTQGDQARPDIPVTEIEVLPKDIVLDQISECSSYGISRRREIVKADDQMLELWETADKDATDGLQVEKTQKMAAEAAGNHQRGATKEPKNKYPSTDSLVEKELSVDKLEISRRLTLPREEGNQSKILERLDSDAQKLTNLQITVQDLLKKVEINEKNTKGKGVEYDEVKGQLEAAQETITKLFDANRKLMNNVEEGTLSSVGKDAAESDESGSVSRRTVSEQARRESEKIGQLHLDVQRLQFLLLKLGEGKESKEKTKMANRSPRVLLRDYLYGGTRTYNQKKKRLPFCACVRPSTKGD 1824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2136 1824 Coils Coil 854 899 - -
Ssu7g2136 1824 Gene3D - 685 863 - -
Ssu7g2136 1824 Coils Coil 658 765 - -
Ssu7g2136 1824 Coils Coil 808 835 - -
Ssu7g2136 1824 Coils Coil 1027 1047 - -
Ssu7g2136 1824 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Ssu7g2136 1824 Coils Coil 1118 1138 - -
Ssu7g2136 1824 Coils Coil 231 251 - -
Ssu7g2136 1824 MobiDBLite consensus disorder prediction 1598 1621 - -
Ssu7g2136 1824 Coils Coil 588 647 - -
Ssu7g2136 1824 Coils Coil 553 580 - -
Ssu7g2136 1824 Coils Coil 1062 1110 - -
Ssu7g2136 1824 MobiDBLite consensus disorder prediction 1607 1621 - -
Ssu7g2136 1824 SUPERFAMILY Tropomyosin 226 421 - -
Ssu7g2136 1824 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1824 - -
Ssu7g2136 1824 Coils Coil 434 468 - -
Ssu7g2136 1824 Coils Coil 1662 1682 - -
Ssu7g2136 1824 Coils Coil 938 958 - -
Ssu7g2136 1824 MobiDBLite consensus disorder prediction 207 229 - -
Ssu7g2136 1824 Coils Coil 525 545 - -
Ssu7g2136 1824 Coils Coil 371 426 - -
Ssu7g2136 1824 Coils Coil 259 363 - -
Ssu7g2136 1824 Coils Coil 1690 1717 - -
Ssu7g2136 1824 PANTHER PROTEIN NETWORKED 4A 1 1824 - -
Ssu7g2136 1824 Coils Coil 1167 1201 - -
Ssu7g2136 1824 Coils Coil 1391 1411 - -
Ssu7g2136 1824 SUPERFAMILY Tropomyosin 413 644 - -
Ssu7g2136 1824 Coils Coil 1279 1299 - -
Ssu7g2136 1824 Coils Coil 483 503 - -
Ssu7g2136 1824 MobiDBLite consensus disorder prediction 1723 1753 - -
Ssu7g2136 1824 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2136 Ssu-Chr7 42097794 42104792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2136 - - gmx:100810726 2408.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2136 7 42097794 42104792 Ssu7g2136 7 42097794 42104792 ECH
Ssu4g1293 4 21169871 21176459 Ssu7g2136 7 42097794 42104792 PCT