Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2124 ATGCTGCTGAGAAACAGATCAAGAGCTGTGACCAAGCCAAGTTTGATGGGTGATCACAGCTCCCAGCCATGTCCAAATCAGAATTACAAAAGAACCATCCCTTCTCTATTTTCACCCAAATTCAGAGACTTCACTGTGAAGTGTCTCTCGGGAGCTGAGGCTTTGCGAAGTCCCACATCGATTCTTGACACCAGAGTCTTATCGCCCTTTGGGAATCCTTTGTCACAGGACAACAAAAGCGAAACTATAATCGCCCCAAGAGTGCACTCAGAAAACAGAAGCTCGTGGGACTCAAAAGGCATTGGCCTGGCTCTTGTTGGTGCACTTAAAGATGAACCTGTTGTTAAAAGTTCAGCTAAACCAAGCGGTGGAACTATTCTGTTTGGAACTAAGCTTAGAGTGAAAATCCCTCCCCTGCCGCTGCCACCACCTTCATTCGGGTCTACAACACGTGCTGCTGCTGATTTTGGTGCCAAAACCAAGGATTCGCAAAAGGATTCTCCATTATCAGTTGGAACAGGTGTTATGACTTTGAGTGAGATGGAGCTTTCTGAGGAGTACACGTGTGTTATCTCACATGGACCTAATCCTAGAACAACACACATATTCGACAATTGTGTTGTGGAAAGCTACTGTTCTCTGCCCAATACCCCCCACTCTCCTTCACTGAATTTCCTTAGCTTCTGTCACACTTGCAAGAAGCATCTTGAGCAGACAAAGGACATCTTTATTTACAGAGGAGAGAAAGCTTTCTGCAGCCAAGAATGTCGCCACCAAGAGATGGTGCTAGATGGAGCAGGAACTTCAGAATTTGACAGATACTAA 825 0.4558 MLLRNRSRAVTKPSLMGDHSSQPCPNQNYKRTIPSLFSPKFRDFTVKCLSGAEALRSPTSILDTRVLSPFGNPLSQDNKSETIIAPRVHSENRSSWDSKGIGLALVGALKDEPVVKSSAKPSGGTILFGTKLRVKIPPLPLPPPSFGSTTRAAADFGAKTKDSQKDSPLSVGTGVMTLSEMELSEEYTCVISHGPNPRTTHIFDNCVVESYCSLPNTPHSPSLNFLSFCHTCKKHLEQTKDIFIYRGEKAFCSQECRHQEMVLDGAGTSEFDRY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2124 274 MobiDBLite consensus disorder prediction 14 29 - -
Ssu7g2124 274 PANTHER FCS-LIKE ZINC FINGER 8 2 267 IPR044593 -
Ssu7g2124 274 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 267 - -
Ssu7g2124 274 ProSiteProfiles Zinc finger FLZ-type profile. 224 268 IPR007650 -
Ssu7g2124 274 Pfam zinc-finger of the FCS-type, C2-C2 219 264 IPR007650 -
Ssu7g2124 274 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2124 Ssu-Chr7 41900183 41901127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2124 - - gmx:100811607 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2124 7 41900183 41901127 Ssu7g2124 7 41900183 41901127 ECH
Ssu4g1301 4 21294131 21294718 Ssu7g2124 7 41900183 41901127 PCT