Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1301 ATGCTGCTGAGGAACAGATCAAGAGCAGTGAGCAAGCCAGCTTTGATGGCTGATCACAGCTCCCAGCAATCCCCTAATCAAAACTATGCTAGAACCATCCCTTCTCTATTTGGGTCACCAAAATTCAGAGATTTCACCAACAAGTGTCTCTCAGGAACCGAGGCTTTAAGGAGCCCAACTTCAATTCTTGACGCCAGAGCATTATCATCCCCTTTTGCCTTTGGAAACCCGTTCTCAACCCTTCCCCATAAAACCTCCTCACATAACAGATCCTCCTGGGACAAGCCAAATTCAAAGGGCATTGGCCTTGCTCTTGTTGGTGCTCTcaaagatgatgatgataatgaccCAATTCGTTACAATTCTGAAGCCAGCAAAGGAAATGTCCTGCTCAGAGTGAAAATCCcatttgatgatattggaactaAAACCAAGGATTCAAAAAATTCAGGATCGGGAATTTGTGCAAAGGATTGTTCTTCTCAAAGTGTAGGCGTTCTGTCTTGGAGTGAGATGGAGCTTTCTGAGGAATATACATGCGTGATATCCCATGGACCTAACCCAAGAACCTACACACATATTCAATAA 588 0.415 MLLRNRSRAVSKPALMADHSSQQSPNQNYARTIPSLFGSPKFRDFTNKCLSGTEALRSPTSILDARALSSPFAFGNPFSTLPHKTSSHNRSSWDKPNSKGIGLALVGALKDDDDNDPIRYNSEASKGNVLLRVKIPFDDIGTKTKDSKNSGSGICAKDCSSQSVGVLSWSEMELSEEYTCVISHGPNPRTYTHIQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1301 195 PANTHER FCS-LIKE ZINC FINGER 8 2 194 IPR044593 -
Ssu4g1301 195 MobiDBLite consensus disorder prediction 1 29 - -
Ssu4g1301 195 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1301 Ssu-Chr4 21294131 21294718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1301 - - gmx:100788456 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1301 4 21294131 21294718 Ssu4g1301 4 21294131 21294718 ECH
Ssu4g1301 4 21294131 21294718 Ssu7g2124 7 41900183 41901127 PCT