Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2113 ATGGACAGAACCAGAGAATCCAGAAGATCATCCATGGCCTCCTCCACCAACGGATTTCCCAGACGCAGACATCGAACTATTGCTCTCAGAGACTCTTCCGAGGAAGGAGCTGTGGATTTGAGAGAAGCTGCGAGTAAGAGAGGAAGGAATCGAGACAGGGACCCGACTAACAGGAGCAAGAGGAGGAGAGGCTCTCACTCACAAAGCACCGAAGAGAGCGTCGGAAACGAACAAGACGACGACGTTGTAGACGCTGGGGCTTCTAAGATCCGCTCCCCTAATAATACGACGTCGTTCTCCGCCGATCAAAACCATCGCCGGAGCTTCACGCCGGCGAAACCGCCGCCGTTCAATATAACGGAGGAGATGATCGGCGTGACCGTTCCCAGGAAGGCTCGTTCAGCTTCTGCGAAAAGGTCTCACGAAAGTTGGGTCTCCGCAAGCAGCGGCGGCGGGGGCGGGGAGGAGCTGAATTTCCGGCCACGGTCGAGTTCCCCCGGAGGACAGAGTGTTGAACCGGTCTCGCCTTCTTCTTCGAATGTTTCTAAAGGGATTGAAGCTGTTCCTAAGACATCAAAATCGTCTTCATCGGACATCGAGATTGAGATAGCTGAGCTTCTGTACGGTTTGAAGACTTCAAAGAACCACGAGTCTTCTTCGAAAAAGCTTGAAGCAAGCGTGAATCATCACGCATCTGTGTCTTGTCCCCCTGAGTATGTTGagaagaagaaaatggaagaCAACAACAATTCTTCCACCCTGGTTCCGAATAATTCGACTGAAGAGTTAGTTAGAAGTCAGAGTGAGCAACCTGCTGATGTGGATTGTCACGATGGTCATGAAAATGGACCATCTGAAGCTCCAAAAGAGGACAATGGGGAAGACAAAATGAATTCAGGTGCCGGATGTGGGGATGCTTCGGCAGACCGAAGATCGGTCTCCCCTACAAGGGAATCGCCGTCATGGTCCAAGTTGGATGCTGATAAACAGGATTCAGCTTCTACAAGAGTGATGTCTGCTGTTCCGGAGGCCAACACCCAACGAGTAGGCATGTTTGAGATAGATCTGATGGCTCCTCCTCCTATGGGGCTGTCCCCAGAAGGGGATGACTTGTCAAGGGGTGATTTCATATCAGAAACTAAAGCTTTGGCACTGGATGTGGAAATGAAGAGGGAAAAAAGTGTCAAGGTGGAGAGACCAGTTAAGAAGGAGAAGACTCCAGAAGAAATTGGAGAGGCAAAAATGGTCACATTTAAGGAGAAGGTGGATGTGCTAAAACATGATTTGGAGAAGCCAAACAATGACAGTGACATAaagacaaacaataaattagaaGAGCAGGATAGGAATAAGGAACTATCTACTATATCATCAAATCCCAAAGTAGAGAATACCGCTCATTCTACTTCAATCCCTTTATCAACAGCTGAATCAGGACGGCCAAGCAGTCTCTCTCCTATTGGATACAGGCCGCCCTTGCAACCAGTTGGGAAGACGGATAAAACCACGGGATCATTGACACTACAgCGTGTGAATTTTGTCCTCTCTCAACCACGACCAAAGAGATGTGCAACCCATTATTACATTGCTTGTAACATCTTACAACAGCAGTTTACAAAGATGAACCCCCCTTTGCCAGCAGCTATTGGCTCTGGTTCTCTATGTGGCACGAAACCCAACAATGTCAACTGTGTGCCCTCTGCAGAAAGTATGGCAGTTGGAAAGCAATCTCAAAAACACTTGCCAATTGTAAACCATAATGCTGCACCAGAGAGAGGGTGGGCTGCCACCAGCAATCCTAGTCTTACCACAGCCAAAAGTTCTAATAATGCTAACCTAAGGGATTCAGCTCATAGGGCGCAGCTTGTACACCAGCAAGGTCCAAATCCTGGGTCAACTGGTAATCTAGTGCATGGTCCTGCTTTCCTCTATCCTCCAGGCCAGCATCAAGCATCAGTAGCAGCAGCTACTAATCTTGCAGGAGCTGTGAATTCTCCTAACAGCACTTCCTCGTATAATAAATCCCATAGTTCAGTTGGCGGATCTCTTGGTACCTCCTCAACTTTGCCAGTAGTTGCTCCTGCAATAAGCTTTAGCTACCCAAATTTTTCAGCCAATGGTTCTTCTCCGTATATGACAATAGTTCACAATAATGGGTATTCATTCCCTTTTTCAACTTCTCTTGGAGCAACTGCAGCAATCAGAGGTGCAAGCCCTGCTCAAGCAACACATGTACTTGGTGGGCCTTTCTACTCTTCTCAAACTTTCCATCCGCTTCAGCATTCACAACAGCACCATCAGTCACAAGCACTGGTTCAACCAAGTTATCTTAATGCAAGCACTTCAAGTAGTTCATCGTCTCATAAGCAGTCACAAGGTGCACAGGTTAATGGCAATAATATTTTGACCTCTACAACTATGGAACAACAGTCACAAAAGCGACAGACTTCACTGCCTCCTCTTCGCAAGCATGAGACTGAGATGGGCGGAGGGAATGCACCTTCTGTTGCTAATCGAACATCTTATCAACAGAAGAATGTGCATGGGCAGAATTTTACAATTCCAGTTCAGCCAGTGAACTTTTCTTTCAAGTCATCTGCAACATCAGATGTTGTTGGCAATGGTGGAAATTTTGGTGACAAACAACAACAGCAACGGGCTTTAAAGGGAGGAGTGGAGAATATACCATCTCAAGCATTTGCAATATCATTTGCTGCATTTAATGGGACCAGTGTTCCTTCTAACCTTAACTTCTCATCCATGGCACAGAATCCCGTGATACTTCACAGCCTGCCTGATATTGCATGGCAAGGATATCAAGTTGCAAGCACACCTCAGACTTCTCAGCAGAAGACTTACTCAATTGCTGAAGCGAAGAGTGGAGGAAATTCTTCACACcaagatgatgaaaaaaaaatcactcatGGTAAGTCTTCAAGCAATGGGCCCACCACCCTTGTTTTTGATAATTCATCAAAGAATCTTAACTTTGTGCTATCTACTGCGAATGGAAACTGGTCTAGTCACACCATTGCTTCAACTGCAATAACAAGTGTGCCTCTTTCTAATAATGCTTCAAGTTTGCAACAGCCACCACATCTGCTTCAGCTTCCGAAGCAGCATGCTATGCAACAGCAGCAACCTGCTATGGCAACTCGATATAAAGCATCATCCACCAATAGCACTCCTGCTACAAAATTTGCAAACAATGCTCCTGTCTTCTCACAAACTCTTACTCAATGCAAAAGTTCTAACCAAGCTTCTCACACTAAGGCCTCGGGTAGAGCTGCAGATTCTCATGTTCATCACTCATCAATCGTAACATCTAATACTCCAACCCTCAAAAAATTTTCTCAGGAACAAGGGAGAGTTTTGCAGGGTCATATGCAAATTTCTTTTGGGGGAAATTACATGACGTCCCTGCCACCCCAAGGGCAACAACTACTCAATAACAACCAGCCCTTGTGTACAACAGCTGCAGGAACTCCATTTAGTGGGGGCAATGAGAAGTCAAATTCGGAAGAAAGTAAAGTTAGTTCGTTGGTGAACGCTTCACAATTGCAACAAACTGAAAATTCTGCTGGGAGTGGCCAAAAGTCTTCTCCAGTTTGTGGGAGAAATGTCCCATCAATATTAAGTTCATGCCCCAGCCAACTATCAGAGCTAAAGTATTAG 3675 0.4541 MDRTRESRRSSMASSTNGFPRRRHRTIALRDSSEEGAVDLREAASKRGRNRDRDPTNRSKRRRGSHSQSTEESVGNEQDDDVVDAGASKIRSPNNTTSFSADQNHRRSFTPAKPPPFNITEEMIGVTVPRKARSASAKRSHESWVSASSGGGGGEELNFRPRSSSPGGQSVEPVSPSSSNVSKGIEAVPKTSKSSSSDIEIEIAELLYGLKTSKNHESSSKKLEASVNHHASVSCPPEYVEKKKMEDNNNSSTLVPNNSTEELVRSQSEQPADVDCHDGHENGPSEAPKEDNGEDKMNSGAGCGDASADRRSVSPTRESPSWSKLDADKQDSASTRVMSAVPEANTQRVGMFEIDLMAPPPMGLSPEGDDLSRGDFISETKALALDVEMKREKSVKVERPVKKEKTPEEIGEAKMVTFKEKVDVLKHDLEKPNNDSDIKTNNKLEEQDRNKELSTISSNPKVENTAHSTSIPLSTAESGRPSSLSPIGYRPPLQPVGKTDKTTGSLTLQRVNFVLSQPRPKRCATHYYIACNILQQQFTKMNPPLPAAIGSGSLCGTKPNNVNCVPSAESMAVGKQSQKHLPIVNHNAAPERGWAATSNPSLTTAKSSNNANLRDSAHRAQLVHQQGPNPGSTGNLVHGPAFLYPPGQHQASVAAATNLAGAVNSPNSTSSYNKSHSSVGGSLGTSSTLPVVAPAISFSYPNFSANGSSPYMTIVHNNGYSFPFSTSLGATAAIRGASPAQATHVLGGPFYSSQTFHPLQHSQQHHQSQALVQPSYLNASTSSSSSSHKQSQGAQVNGNNILTSTTMEQQSQKRQTSLPPLRKHETEMGGGNAPSVANRTSYQQKNVHGQNFTIPVQPVNFSFKSSATSDVVGNGGNFGDKQQQQRALKGGVENIPSQAFAISFAAFNGTSVPSNLNFSSMAQNPVILHSLPDIAWQGYQVASTPQTSQQKTYSIAEAKSGGNSSHQDDEKKITHGKSSSNGPTTLVFDNSSKNLNFVLSTANGNWSSHTIASTAITSVPLSNNASSLQQPPHLLQLPKQHAMQQQQPAMATRYKASSTNSTPATKFANNAPVFSQTLTQCKSSNQASHTKASGRAADSHVHHSSIVTSNTPTLKKFSQEQGRVLQGHMQISFGGNYMTSLPPQGQQLLNNNQPLCTTAAGTPFSGGNEKSNSEESKVSSLVNASQLQQTENSAGSGQKSSPVCGRNVPSILSSCPSQLSELKY 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 947 962 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 162 199 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 249 267 - -
Ssu7g2113 1224 PANTHER TIC-LIKE PROTEIN 1 1224 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 213 344 - -
Ssu7g2113 1224 PANTHER PROTEIN TIME FOR COFFEE 1 1224 IPR039317 GO:0042752
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 453 482 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 427 452 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 947 985 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 89 107 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 24 68 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 805 836 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 1159 1224 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 1 199 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 271 296 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 427 502 - -
Ssu7g2113 1224 MobiDBLite consensus disorder prediction 1084 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2113 Ssu-Chr7 41737851 41742814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2113 - - gmx:100784698 1843.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2113 7 41737851 41742814 Ssu7g2113 7 41737851 41742814 ECH
Ssu4g1315 4 21608471 21613051 Ssu7g2113 7 41737851 41742814 PCT