Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2111 ATGGAGCTCAGTAAAGTCACCCTAGAGATCTTCTCCAAACTGGAGCACAAATGGCTCTCTCATTGTAAAGCCGCCAACAAAACCCGTGTTCTTAGCATTGACGGCGGCGGAACCGCCGCCATTGTCGCCGGCGAAGCTCTCATCTACCTCGAGGATCAGATCCGTCTCCACACCTCCGATCCCCACGCTCAGGTAGCCGATTTCTTCGACATCGTCGCCGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGTGACGCCTTCGGCAGGCCGCTCTACACCGCCAGAGAAGCCGTCCGTCTCGTCTCCGAGAGGAACTCCGAACTCTACAAGCTGAAATCCGGCGGCGTCTTCCGCCGGCGCCGGAGATTCTCCTCCAGGAGCATGGACAGCGTGCTGAAGCAAGTGTTCCAGAGAAAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGTAAACCGCTGCTTATCCCTTGCTTCGACCTCAAGAGTTCCGCGCCTTTCGTCTTTTCCCGAGCCGACGCGTCCGAATCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGCCGCGCCACGTCGGCGACGCCGAGCCATTTCAAGCCGTTCCACTTCGCCTCGGTCGACGGCAAGACCTCGTGCGCCGCCGTGGACGGCGGCCTCGTCATGAACAACCCTACCGCGGCCGCCGTCACGCACGTCCTCCACAACAAGCGCGATTTCCCGTCGGTGAACGGCGTCGAGGATCTCCTGGTCCTCTCCTTGGGGAACGGTTCCACGAGCGCGAAGGCGTGCGAGAATCGCACGTGCTCCACGCCGTCGGTGGTTGACATTGTGCTCGACGGCGTTTCCGAGACCATAGACCAGATGCTAGGCAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATTCAGGCGTTCGGTTTGGGAAGTGATGCAATGAGGAAGGAGGAGGTGCTCAAAGAGAGGGGGCTTGAGTCGTTGCCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGTCACCGGAAAACCTAGCCCGCCGTCTAGTCCCTGCAAGGATTCCGCCGTCAACCCGCTCGCTAACGGCCGCTag 1140 0.5982 MELSKVTLEIFSKLEHKWLSHCKAANKTRVLSIDGGGTAAIVAGEALIYLEDQIRLHTSDPHAQVADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAVRLVSERNSELYKLKSGGVFRRRRRFSSRSMDSVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFHFASVDGKTSCAAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSTSAKACENRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSDAMRKEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVVTGKPSPPSSPCKDSAVNPLANGR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2111 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Ssu7g2111 379 PANTHER PATATIN-LIKE PROTEIN 6 1 379 - -
Ssu7g2111 379 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Ssu7g2111 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Ssu7g2111 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Ssu7g2111 379 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 379 - -
Ssu7g2111 379 SUPERFAMILY FabD/lysophospholipase-like 26 311 IPR016035 -
Ssu7g2111 379 MobiDBLite consensus disorder prediction 358 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2111 Ssu-Chr7 41701495 41702796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2111 1 379 Acyl Lipid Metabolism Gene Families AT3G63200 70.649 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2111 - - gmx:100777557 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2111 7 41701495 41702796 Ssu7g2111 7 41701495 41702796 ECH
Ssu4g1317 4 21672541 21673889 Ssu7g2111 7 41701495 41702796 PCT