Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2096 ATGGGCATTCCTTCAGAAATTGCAGCGGCTGCGATTGGTTTGTTGTGCCTGTGGAGGGTTGCTGACAGCGTTCCCAACACCAACATCACTACCGTTCTGTGCAACGTTGGGGTGTACACCTCAGGTGATCCTTTTGCTGTCAGTTTATCCTATATTGTTGGAGAATTGGAGACACAGACACCAACCCGGAAAAATTACGACTACTACAACATTTCTCCTTATCCTAATGCCTTTGCCTATGGACACGCTGCTTGCAACCTAAATCTGACTTCCTCTGACTGCAAAACATGTCTTGGTGTGGCTAAGACGACCATGTTCAGCGCGTGTCCGAAACGTATAGGAGCTCGCTCGGTGCTACATGATTGTACAATCAGGTATGAGCAGTACCCATTCGACGATTAG 402 0.4776 MGIPSEIAAAAIGLLCLWRVADSVPNTNITTVLCNVGVYTSGDPFAVSLSYIVGELETQTPTRKNYDYYNISPYPNAFAYGHAACNLNLTSSDCKTCLGVAKTTMFSACPKRIGARSVLHDCTIRYEQYPFDD 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2096 133 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Ssu7g2096 133 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 132 - -
Ssu7g2096 133 Gene3D - 26 131 IPR038408 -
Ssu7g2096 133 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 132 - -
Ssu7g2096 133 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2096 Ssu-Chr7 41346033 41346434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2096 80 131 Receptor kinase-like Gene Family AT4G05200 34.615 5.48e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2096 - - gmx:102662232 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2096 7 41346033 41346434 Ssu7g2096 7 41346033 41346434 ECH
Ssu4g1331 4 22025662 22026066 Ssu7g2096 7 41346033 41346434 PCT