Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1331 atgGGCTTTCCTACAAAATATGTATCAATTGCGATTGGTTTGTTGTGCCTGTGGAGTGCTGCTGACAGTATTCCCAACACCAGCATCATCAACGTTCTCTGCAACAATGGGGTGTATACCTCAGGGGACCCTTTTGCTATTAGTTTAAGCTATGTTTTGGGGGACTTAGAGAAGGAAACACCAGCCCAGAAGAATTATGACTACCACAACATCTCACCCTATCCTAATGCCTATGCCTATGGACATGCTACTTGTAACCTTAATCTTGCATCCTCTGATTGCAAAACATGTCTTGGTGCTGCTAAAACGGCCTTGTTTAGCACATGTCAGACACCACGGATCGGGGCTCGTTCGGTGCTCCATGATTGCACAATAAGGTACGAGCAATACCCATTTGACGATTAG 405 0.4494 MGFPTKYVSIAIGLLCLWSAADSIPNTSIINVLCNNGVYTSGDPFAISLSYVLGDLEKETPAQKNYDYHNISPYPNAYAYGHATCNLNLASSDCKTCLGAAKTALFSTCQTPRIGARSVLHDCTIRYEQYPFDD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1331 134 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Ssu4g1331 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 133 - -
Ssu4g1331 134 Gene3D - 25 132 IPR038408 -
Ssu4g1331 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 133 - -
Ssu4g1331 134 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1331 Ssu-Chr4 22025662 22026066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1331 - - gmx:102664018 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1331 4 22025662 22026066 Ssu4g1331 4 22025662 22026066 ECH
Ssu4g1331 4 22025662 22026066 Ssu7g2096 7 41346033 41346434 PCT