Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2093 ATGGATAATTCCAACTTTCAACGTCTGTTCACTCTCCTCTTTCTATTCTTCATTGTACCCTCTTTCGGTCAACAATCTTTCAGGCCCAAAGCCCTCGTTGTCCCAGTTAAAAAAGACGCCTCCACGCTCCAATACCTCACTCAAATCAACCAAAGAACGCCGCTAGTCCCAGTGAACCTCGTGGTTGATCTCGGAGGTCAATTTCTCTGGGTCGACTGCGACCGCAACTACGCCTCCTCCACCTACCGCCCCGCGCGGTGCCGCTCGGCCCAGTGCTCCCTCGCCGGAGCCAACGGCTGCGGCGACTGCTTCTCCGCGCCCAGGCCGGGCTGCAACAACAACACCTGCGGCCTCACGCCGGACAACACCGTCACCCACACCGCCACTGGTGGCGAGCTCGCGGAGGACGTCGTGTCCGTCCAATCCACCAACGGCTTCAACCCGGGACGAAACGTCAGCGTTTCCCGCTTCCTGTTCTCCTGCGCCCCAACCTTCTTGCTGCAAGGGCTCGCCAATGGAGTCTCGGGAATGGCCGGTCTCGGTAGAACTAGAATCGCTCTCCCCTCGCAGTTCGCTTCGGCTTTCAGCTTCCACAGGAAGTTCGCCATTTGCCTCTCCTCTTCAAACGGCGTCGCTTTCTTCGGAGACGGCCCTTACGTTCTTCTCCCTGACGTCGATGCTTCCCAGTTACTCACCTTCACACCACTGTTGACGAACCCGGTTAGCACCGCCTCCGCTTTCTCGCAGGGAGAGCCTTCTGCTGAGTATTTCATTGGCGTGAAATCCATCAGAATCGACGAAAAGGTGGTGACAGTTAACACGACTTTGTTATCCATAGATAACAAGGGCGTTGGTGGAACCAAGATTAGCACAGTGAACCCTTACACGGTTTTGGAGGCTTCCATCTTCAAAGCAGTGACCAAGGCTTTCGTCAACGCGTCTGCTGCCAGGAATATAACGAGGGTGGCTTCTGTGGCGCCGTTTGAAGTGTGCTTCAGCAGCGAGAACGTGCTCAGCACGCGGCTAGGGGCGTCGGTGCCAACCATTGAGCTTGTGCTGCAGAACCAGAATACGATTTGGAGGATTTTTGGGGCGAACTCGATGGTGAGTGTGAGCGATGAGGTGCTGTGTCTTGGGTTTGTGAATGGTGGCGAGAACCCAAGGACTTCGATTGTCATTGGTGGGTATCAGCTGGAGGATAATCTTTTGCAGCTCGATTTGGCCACGTCCAGATTGGGCTTCAGCTCTTTGCTCTTCGGAAGCCGAACTACTTGTGCAAACTTTAACTTTACCTCCGCCGCGTAA 1305 0.5525 MDNSNFQRLFTLLFLFFIVPSFGQQSFRPKALVVPVKKDASTLQYLTQINQRTPLVPVNLVVDLGGQFLWVDCDRNYASSTYRPARCRSAQCSLAGANGCGDCFSAPRPGCNNNTCGLTPDNTVTHTATGGELAEDVVSVQSTNGFNPGRNVSVSRFLFSCAPTFLLQGLANGVSGMAGLGRTRIALPSQFASAFSFHRKFAICLSSSNGVAFFGDGPYVLLPDVDASQLLTFTPLLTNPVSTASAFSQGEPSAEYFIGVKSIRIDEKVVTVNTTLLSIDNKGVGGTKISTVNPYTVLEASIFKAVTKAFVNASAARNITRVASVAPFEVCFSSENVLSTRLGASVPTIELVLQNQNTIWRIFGANSMVSVSDEVLCLGFVNGGENPRTSIVIGGYQLEDNLLQLDLATSRLGFSSLLFGSRTTCANFNFTSAA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2093 434 ProSiteProfiles Peptidase family A1 domain profile. 45 415 IPR033121 -
Ssu7g2093 434 Pfam Xylanase inhibitor C-terminal 255 415 IPR032799 -
Ssu7g2093 434 PANTHER ASPARTYL PROTEASE-RELATED 9 433 IPR001461 GO:0004190|GO:0006508
Ssu7g2093 434 Gene3D Acid Proteases 29 216 IPR021109 -
Ssu7g2093 434 CDD xylanase_inhibitor_I_like 50 418 IPR033868 -
Ssu7g2093 434 Pfam Xylanase inhibitor N-terminal 45 216 IPR032861 -
Ssu7g2093 434 SUPERFAMILY Acid proteases 36 424 IPR021109 -
Ssu7g2093 434 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 9 433 - -
Ssu7g2093 434 Gene3D Acid Proteases 217 432 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2093 Ssu-Chr7 41315181 41316485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2093 32 416 Miscellaneous Gene Families AT1G77480 21.429 3.13e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2093 - - gmx:100797018 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2093 7 41315181 41316485 Ssu7g2093 7 41315181 41316485 ECH
Ssu4g1339 4 22122707 22124062 Ssu7g2093 7 41315181 41316485 PCT