Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2085 ATGAGGAGAGTCGAGATTTTCAATTTAACAACACTTGCTCTGACATTTCTGGCACTTGTGCCAAAGATGGGGAGCCAGATCATGCTACCGGTTATTCCTTTGCCACCACCATCTCTTCACCCACTTTGTTTATCCCAGCTAGCACTAGTAAGCTATGCTTGTGCAATGTTGCCTCTCACGGCAACATCACCACCTTTACCACTCACACCTCCACCCTCTCCTTCGTCCCCTGATGATGACGAGGGACACAGGAGTCACCCAAGTCATGACCAACGCCACactcctcaagaagaaaactgTTGCCGGTGGGCTAGGGAAATGGACAGCCAATGTGTATGCGAAATCCTAGTTCTATTGCCTCCCTTCCTTACTAGACCTTTGCATCGGTACTCAATCAGCATTGGAGAATCGTGTAATGTCACTTACTCGTGCGGTGGGCCAATGTGA 447 0.472 MRRVEIFNLTTLALTFLALVPKMGSQIMLPVIPLPPPSLHPLCLSQLALVSYACAMLPLTATSPPLPLTPPPSPSSPDDDEGHRSHPSHDQRHTPQEENCCRWAREMDSQCVCEILVLLPPFLTRPLHRYSISIGESCNVTYSCGGPM 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2085 148 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 148 - -
Ssu7g2085 148 MobiDBLite consensus disorder prediction 63 96 - -
Ssu7g2085 148 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 84 142 IPR036312 -
Ssu7g2085 148 MobiDBLite consensus disorder prediction 77 96 - -
Ssu7g2085 148 PANTHER - 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2085 Ssu-Chr7 41233831 41234277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2085 - - pvu:PHAVU_007G170000g 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1341 4 22190377 22190841 Ssu7g2085 7 41233831 41234277 PCT