Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1341 ATGGAGCTTTTCAATTTAATAGCAGTGGCTCTGACATTCCTAGCAATAGTGCCAAAGATGGAGAGCCAGATTAAGCCCCCACTTATTACTATTCCAACAACTCCTCGTCCACTTTGTGCGTCCCAATTTGCACTAGTGAACTATGCATGTTCAAGGTTGCCATTCACCCCAGGAACCCCACCTGATTCCttaccttcttcttcttcttccccgACCTCTCCTGCATCCCCTGATGATGACACAAACAACCACCACAGTCACAGACGCAGGCATGGACACAAGCACAGGCACCACCAGACCCCTGATGAAGAAAACTGCTGCCGGTGGGCTAAGGAAGTAGACAACCAATGCGTGTGTGAACTTCTGGTTCGCTTGCCACCCTTCCTTATCAGACCTGTGCATCAGTACACACTCAACATTGGAGAATCATGCGACATCACTTACTCATGCGGTGCGCCAATCTGA 465 0.4688 MELFNLIAVALTFLAIVPKMESQIKPPLITIPTTPRPLCASQFALVNYACSRLPFTPGTPPDSLPSSSSSPTSPASPDDDTNNHHSHRRRHGHKHRHHQTPDEENCCRWAKEVDNQCVCELLVRLPPFLIRPVHQYTLNIGESCDITYSCGAPI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1341 154 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 154 - -
Ssu4g1341 154 PANTHER - 2 154 - -
Ssu4g1341 154 MobiDBLite consensus disorder prediction 62 79 - -
Ssu4g1341 154 MobiDBLite consensus disorder prediction 57 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1341 Ssu-Chr4 22190377 22190841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1341 - - gmx:102666530 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1341 4 22190377 22190841 Ssu7g2085 7 41233831 41234277 PCT