Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2081 ATGATTCCAGCGTGTAAGATCAGGAAAGAGAAGAGCGAAAGTAGTAGGAAGAGTCTTGACATCTTGAAGACACATACAGAATGGGTGCTTCGCAATCAATCTCAGAAAATTCCATCCATGAATTCACAGTCAAGtggaTTTGCAGATGCCAATTACACCCAGTTAACTCAGCTTTACACCACATACAAGAGCAGGGGTCTTGAGATATTGGCTTTTCCGTGCaaccaatttttgaagaaagagCCAGGGACTAGCCAGGAGGCACAGGAGTTTGCCTGTACAAGATATAAGGCTGAGTATCCCATTTTTGGGAAGATACGTGTCAACGGCTCAGATTCAGCATCTGTGTACAAATTCCTCAAAGCGCAGAAATCTGGATTTTTGGGGTCTAGAATCAAATGGAATTTCACAAAGTTTTTAGTCGATGAAGCGGGGCGGGTCATCCAGCGTTATAGCCCAACCACCAAGCCGTTTGCCATTGaaAATGACATCAAGAAGGCGTTGCGGGTGGCTTGA 516 0.4302 MIPACKIRKEKSESSRKSLDILKTHTEWVLRNQSQKIPSMNSQSSGFADANYTQLTQLYTTYKSRGLEILAFPCNQFLKKEPGTSQEAQEFACTRYKAEYPIFGKIRVNGSDSASVYKFLKAQKSGFLGSRIKWNFTKFLVDEAGRVIQRYSPTTKPFAIENDIKKALRVA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2081 171 ProSitePatterns Glutathione peroxidases signature 2. 70 77 IPR029760 -
Ssu7g2081 171 ProSiteProfiles Glutathione peroxidase profile. 46 171 IPR000889 GO:0004602|GO:0006979
Ssu7g2081 171 PRINTS Glutathione peroxidase family signature 67 83 IPR000889 GO:0004602|GO:0006979
Ssu7g2081 171 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Ssu7g2081 171 CDD GSH_Peroxidase 51 164 IPR000889 GO:0004602|GO:0006979
Ssu7g2081 171 Gene3D Glutaredoxin 25 170 - -
Ssu7g2081 171 Pfam Glutathione peroxidase 45 121 IPR000889 GO:0004602|GO:0006979
Ssu7g2081 171 PANTHER GLUTATHIONE PEROXIDASE 44 171 IPR000889 GO:0004602|GO:0006979
Ssu7g2081 171 PANTHER GLUTATHIONE PEROXIDASE 44 171 - -
Ssu7g2081 171 SUPERFAMILY Thioredoxin-like 45 168 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2081 Ssu-Chr7 41186640 41190655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2081 - K00432 gmx:100527283 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1343 4 22241264 22245067 Ssu7g2081 7 41186640 41190655 PCT