Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1343 ATGGGTGCTTCACAATCAGTCTCAGAAAAATCCATCCATGAATTCACGGTCAAGGATGCCAAGGGCAGAGACGTGAACCTCACCACCTACAAAGGGAAGGTTCTTCTTGTAGTTAACGTCGCTTCAAAATGTGGATTTACGAATTCCAATTACACCCAGCTAACTGAGCTTTACAGCAGATACAAAGACAGAGGTCTTGAGATATTGGCATTTCCATGCAACCAGTTTTTGAAGCAAGAGCCCGGGAGTAGCCAGGAGGCAGAGGAATTTGCCTGTACAAGATACAAGGCTGAGTATCCCATTTTTGGAAAGATACGGGTCAATGGACCTGATACAGCACCTGTCTACAAATTCCTTAAAGCAAATAAATCAGGATTTATGGGTTCTAGGATAAAGTGGAATTTCACCAAGTTTTTGGTTGACAGAGAAGGCCATGTCATCCAGCGTTATGGTCCAACCACCTCACCATTGTCCATTGAagtactctctctctctatttctctccatgGAGCGCTTATGTAA 522 0.4138 MGASQSVSEKSIHEFTVKDAKGRDVNLTTYKGKVLLVVNVASKCGFTNSNYTQLTELYSRYKDRGLEILAFPCNQFLKQEPGSSQEAEEFACTRYKAEYPIFGKIRVNGPDTAPVYKFLKANKSGFMGSRIKWNFTKFLVDREGHVIQRYGPTTSPLSIEVLSLSISLHGALM 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1343 173 PANTHER GLUTATHIONE PEROXIDASE 1 160 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 ProSiteProfiles Glutathione peroxidase profile. 2 173 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 PANTHER GLUTATHIONE PEROXIDASE 1 160 - -
Ssu4g1343 173 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 PIRSF Glutathion_perox 1 167 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Ssu4g1343 173 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 SUPERFAMILY Thioredoxin-like 11 160 IPR036249 -
Ssu4g1343 173 CDD GSH_Peroxidase 11 160 IPR000889 GO:0004602|GO:0006979
Ssu4g1343 173 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Ssu4g1343 173 Gene3D Glutaredoxin 2 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1343 Ssu-Chr4 22241264 22245067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1343 - K00432 gmx:100306136 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1343 4 22241264 22245067 Ssu4g1343 4 22241264 22245067 ECH
Ssu4g1343 4 22241264 22245067 Ssu7g2081 7 41186640 41190655 PCT