Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2070 ATGAACCTCTTCAAAACCGTTTTCTTAGACGACCCGGACCCTCCCGGACCCCAATCCGGATCCAGCAATGCGCCGCGTAACAAAGACCAGGATCCCGATTCCTCGCCCCGATCGAGCACCACCGATTCCGACGGCGGCGACGGTTGGAACTTTGGCGGCCTCATCAAAACCTTGACGGCGAAATCGGAATCCATGATCGAGACCTACCGTCGCGATCTGCAGGAATTCGGCACCGGTTTGAAGAAAGAGATTGAGGTGGCTCAGGGTTCTCTCGGGACCGTGGGTCACGCCATCGACGAGTTCGGAAACACCGTCGTCAAAGGAACGGCTCAGATCATATCCCAAGGCAAGCACGCCATCCTCGCCGTCGATCTCGATTCCGATTCCGATAACAACAGCGCCAATAGAAAGAGCTTGGATTCGAAGCGGTACAGTAGGTTCGACGCTCAGGTTCGTGCCATTCAGGGTGACGTCAGCACCTACTCCGAGGAGCCCGAGGATTTGAACGAGTTCAACGAGTGGAAATTAGGGTTTTCGCTGGAGGGGAAGATCGAGGAAATGGAGGGGTTTTTCAGAGAGAATGATGCTATGGAGAGTGTTTACAAAGGGGTTGTTCCAAACACTGTTGATCACGAAACTTTCTGGTATAGGTATTATTATAAGGTTTATAAGCTCAAGAAAGCTGAAGATTTGAGGGCTAGGCTTGTGAGTGGAATGTCTGGGGAAGAGGAGGATTTGAGTTGGGAtgttgaagatgatgatgatgatgaagctAAACCTGTGGTTATGATCAATAAACAGGTTGGTGGCAGTGGGGGGGGAACAAAGAGATTGAGTGTGGAAGAGGTACAGCATTCTGGTGAAGAGGAATCTAAAGTAGAAAAGAGGGACAGTTTATTGCAAAATGAGGAAGTTGGTAACAAGATGGATAAGTCTGTTGAGGAATTACAAGTTCAGAAATCTGAATTTGTTGGTGAGAAGGGTGGTGGAAGTAGGGAAATTAGTGAGGAGGCATCAAAGTCAAAAGTAGATGATGCTGTGAGCAAGTATGATTCTGCGGCCGAATCTGATGAGAAGGTGATAGAGGAAAGGGAGGGTGGTGCCGAGAAATCTTCGAGTAAAAGTAATGAGTCTTCAGTGGTTGAAATTCAGCACTCGGCGAATGAGGAGGAGGACCTTGGGTGGGATGAGATTGAGGATCTTAGCAGCATTGATGAAAAGAAGGCAACGCAGAGTGGTGGCACAAGCAAAGTTGATTTGCGGAAGCGACTTAGTGCTGCGGAAGAAGAGGAAGACTTGAGTTGGGACATTGAAGATGATGAGCCTGCTAAggcttga 1338 0.4776 MNLFKTVFLDDPDPPGPQSGSSNAPRNKDQDPDSSPRSSTTDSDGGDGWNFGGLIKTLTAKSESMIETYRRDLQEFGTGLKKEIEVAQGSLGTVGHAIDEFGNTVVKGTAQIISQGKHAILAVDLDSDSDNNSANRKSLDSKRYSRFDAQVRAIQGDVSTYSEEPEDLNEFNEWKLGFSLEGKIEEMEGFFRENDAMESVYKGVVPNTVDHETFWYRYYYKVYKLKKAEDLRARLVSGMSGEEEDLSWDVEDDDDDEAKPVVMINKQVGGSGGGTKRLSVEEVQHSGEEESKVEKRDSLLQNEEVGNKMDKSVEELQVQKSEFVGEKGGGSREISEEASKSKVDDAVSKYDSAAESDEKVIEEREGGAEKSSSKSNESSVVEIQHSANEEEDLGWDEIEDLSSIDEKKATQSGGTSKVDLRKRLSAAEEEEDLSWDIEDDEPAKA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2070 445 PANTHER SYNAPSE-ASSOCIATED PROTEIN 86 440 - -
Ssu7g2070 445 MobiDBLite consensus disorder prediction 281 371 - -
Ssu7g2070 445 Gene3D BSD domain 136 238 IPR035925 -
Ssu7g2070 445 PANTHER PROTEIN, PUTATIVE-RELATED 1 86 - -
Ssu7g2070 445 PANTHER PROTEIN, PUTATIVE-RELATED 86 440 - -
Ssu7g2070 445 MobiDBLite consensus disorder prediction 266 445 - -
Ssu7g2070 445 SUPERFAMILY BSD domain-like 144 232 IPR035925 -
Ssu7g2070 445 MobiDBLite consensus disorder prediction 1 48 - -
Ssu7g2070 445 Pfam BSD domain 174 230 IPR005607 -
Ssu7g2070 445 SMART wurzfinal6 174 226 IPR005607 -
Ssu7g2070 445 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 86 - -
Ssu7g2070 445 ProSiteProfiles BSD domain profile. 174 226 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2070 Ssu-Chr7 41004536 41005873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2070 - - gmx:100796508 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2070 7 41004536 41005873 Ssu7g2070 7 41004536 41005873 ECH
Ssu4g1360 4 22463710 22464954 Ssu7g2070 7 41004536 41005873 PCT