Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2064 ATGCTCAAGCACCTCCGCCGCCTCCTCCGCCGTCTCCGGCTGCCAATTCGCCGCCGCTTGAAGTCCAAAATAGTAGTGATCAACAAGTCCGGGAAGAACGGCCCAAAAGCCCATCCCGAAGCAAGCCCAAATTTTTCCGCCACGGTCCACCCCAACGCTCAATTGGGTACTCCGAAACCAATTCGGGTGGCGACCTTCAACGCCGCCCTGTTCTCCATGGCACCCGCGCTTCCAAAAGCGCCACCCACGTTCGAGGACCAAAACGGCGTCACTTCGAACCCCGGAAGCGTGAATTCGCGATCGAAGTCCGCGAACGAACGCCCCAGAAGCATATTGAAGCACTCGCAATCGCGATCAGCGAACAGAGTAGACGACGACGACAACGTGGGCAGCAGAGAGCAAGCGAGGTTCGCGAAATCGAAGATGAGGGTTTCCATAAATTTACCGGACAATGAGATTTCGCTGCTGCGAAGCCGACAATCGAGCTTCTCGGAACACGACAAGGAGGGGTGGAGGCCCTCGTGGGGGAGTGGGGTCCACGTGAGTAACAACAGAACGGTGGTCGAGGTTCTGAAGGAAGTGGACGCGGATGTTTTGGGGCTGCAAGATGTGAAGGCTGAGGAAGAGAATGGGATGAAGCCTTTGTCTGATTTGGCTGCGGCTTTGGGAATGAACTATGTCTTCGCTGAAAGCTGGGCTCCTGAGTACGGCAACGCTGTCTTGTCCAAATGGCCCATCAAACGCTGGAATACTCGCACAATCTTTGATCACACTGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTACCCCAAGCTGGTGAACTTAACTTCTACTGTACCCACCTTGATCATCTTGATGAAAATTGGCGAATGAAGCAGGTAAATGCAATAATCCAATCTAGTGATGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTTGATGAATCGGATTACTCCCAGGAAAGATGGACAGATATTGTGAAGTACTACGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGTAAAGACTACACAGATGCTAAGGACTATGCAGGGGAATGCGAGTCAGTGGTCATGATTGCCAAGGGCCAAAGTGTGCAGGGGACATGTAAGTATGGAACTCGGGTAGACTACATATTATCATCCTCAAATTCTCCATATAAGTTTGTTCCCGGTTCCTATTTAGTCCTTTCTTCCAAAGGGACATCAGATCATCACATAGTGAAAGTTGACGTGGTGAAGGCAAATAACCCTGAAGAAAATGTGACAAAGAGTCCGCAACAACCAAGAGAGAGAGTTATAAGAATAACACAATCCAATCCGTCAAAAGGTATCTGGAAAACACACACTTGA 1380 0.4964 MLKHLRRLLRRLRLPIRRRLKSKIVVINKSGKNGPKAHPEASPNFSATVHPNAQLGTPKPIRVATFNAALFSMAPALPKAPPTFEDQNGVTSNPGSVNSRSKSANERPRSILKHSQSRSANRVDDDDNVGSREQARFAKSKMRVSINLPDNEISLLRSRQSSFSEHDKEGWRPSWGSGVHVSNNRTVVEVLKEVDADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRWNTRTIFDHTDFRNVLKATIDVPQAGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKANNPEENVTKSPQQPRERVIRITQSNPSKGIWKTHT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2064 459 MobiDBLite consensus disorder prediction 106 139 - -
Ssu7g2064 459 MobiDBLite consensus disorder prediction 85 105 - -
Ssu7g2064 459 MobiDBLite consensus disorder prediction 80 140 - -
Ssu7g2064 459 Gene3D Endonuclease/exonuclease/phosphatase 169 424 IPR036691 -
Ssu7g2064 459 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 3 170 - -
Ssu7g2064 459 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 3 170 - -
Ssu7g2064 459 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 181 458 - -
Ssu7g2064 459 SUPERFAMILY DNase I-like 182 421 IPR036691 -
Ssu7g2064 459 MobiDBLite consensus disorder prediction 28 53 - -
Ssu7g2064 459 Pfam Endonuclease/Exonuclease/phosphatase family 185 414 IPR005135 GO:0003824
Ssu7g2064 459 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 181 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2064 Ssu-Chr7 40875863 40879321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2064 - - gsj:114390420 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2064 7 40875863 40879321 Ssu7g2064 7 40875863 40879321 ECH
Ssu4g1363 4 22488588 22491227 Ssu7g2064 7 40875863 40879321 PCT