Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2060 ATGGCGAAGTGCACCACTGCTTCCTACGCAGTGCTTCTACTTTTGTTCTGCTTCCTTCATGTGGAGGCCATTCTGGACCCTGCCGATTTCCTCGCTCTGCAATCCATTCGCAAAGCCCTCGAAGACATGCCCGGCTCCGATTTCTTCTCTTCCTGGGACTTCACCGCCGACCCGTGCAACTTCGCCGGCGTTTACTGCGACTCCGACAAGGTCATCGCCCTCAACCTCGGCGACCCCAGGGCGGGCTCCCCCGGCCTCACCGGCCGCCTCGACTCCGGCGTCGGCAAGCTCTCCGCGCTCGCCGAGTTCACCGTCGTTCCCGGCAGGATATACGGTCCTCTCCCCGAATCCCTCTCCAATCTCAAGAACCTCAGGTTCCTCGGCGTCAACCGCAACTTCATCTCCGGCGAAATTCCGACCAAGCTAGGCGAGTTGCGCAACCTCCGAACCATGGACCTCAGCTACAACCAGCTCACCGGACGCATTCCTCCCTCCGTAGGATCCCTGCCGGAGCTAACCAACCTGATCCTCTGCCACAACCGCCTCTCCGGTTCGGTTCCCCGGTTCGAGTCGCGCACGCTGACCCGGCTCGACCTCAAGCACAACGCTCTCTCCGGTTCGCTCCCTCCCAACTCGCTCCCTCCGTCTCTGCAGTACGTCTCCCTCGCGTGGAACCAGCTGACCGGCCCAATGGACCGCCTCCTCGCCCGCCTCGACCAGCTCAACTATTTGGACCTTAGCCTCAACCGCTTCACGGGCCCAATCCCGGGCCGGATCTTTTCGTTCCCGCTGACGAATCTGCAGCTGGAGAGGAACCAGTTCTCGGGCCCGGTCCAGCCCGCGGATCAGGTGTCGATCCCGACCGTTGATCTCAGTTACAACCGGTTGTCGGGTCAGATATCGCCGATGCTGGCGAGCGTGCAGAATCTGTACCTGAACAACAACGGGTTCACGGGTCGGGTCCCGGTGAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATACAGATTCTGTATTTGCAGCATAACTATCTGACGGGGATTGAGATAAGCCCTACGGCGGTCATTCCGGAGAGAAGCTCGCTGTGTCTGCAGTATAATTGCATGGTCCCGCCCGTAGAGACGCCATGCCCCTTGAGGGCTGGCAAGCAGAAAACCAGGCCTACTGCGCAGTGCAACCAGTTGAAGGCCTGA 1191 0.6071 MAKCTTASYAVLLLLFCFLHVEAILDPADFLALQSIRKALEDMPGSDFFSSWDFTADPCNFAGVYCDSDKVIALNLGDPRAGSPGLTGRLDSGVGKLSALAEFTVVPGRIYGPLPESLSNLKNLRFLGVNRNFISGEIPTKLGELRNLRTMDLSYNQLTGRIPPSVGSLPELTNLILCHNRLSGSVPRFESRTLTRLDLKHNALSGSLPPNSLPPSLQYVSLAWNQLTGPMDRLLARLDQLNYLDLSLNRFTGPIPGRIFSFPLTNLQLERNQFSGPVQPADQVSIPTVDLSYNRLSGQISPMLASVQNLYLNNNGFTGRVPVSFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKQKTRPTAQCNQLKA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2060 396 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
Ssu7g2060 396 PANTHER LRR RECEPTOR-LIKE KINASE 12 393 - -
Ssu7g2060 396 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 12 393 - -
Ssu7g2060 396 Pfam Leucine Rich repeat 191 206 IPR001611 GO:0005515
Ssu7g2060 396 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515
Ssu7g2060 396 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Ssu7g2060 396 Gene3D Ribonuclease Inhibitor 192 373 IPR032675 -
Ssu7g2060 396 SUPERFAMILY L domain-like 40 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2060 Ssu-Chr7 40811770 40812960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2060 24 346 Receptor kinase-like Gene Family AT3G51740 33.611 4.27e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2060 - - gmx:100794756 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2060 7 40811770 40812960 Ssu7g2060 7 40811770 40812960 ECH
Ssu4g1370 4 22625873 22627048 Ssu7g2060 7 40811770 40812960 PCT