Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1370 ATGGATATCGCTTCCTATTCTCTGCTTTTCATGTGCTTCCTGCAATCCGTGCGAGGGATATTGGACCCCAACGATTTCCTCGCTCTACAATCGATTCGAAAGTCGCTTCACGATGTCCCCGGTTCCAATTTCTTCGCCTCTTGGGACTTCACCGCCGACCCGTGCAACTTCGCCGGCGTTTTCTGCGCCGCCGATAGGGTCATCGCGCTCAACCTCGGCGACCCCCGGGCCGGTTCGCCCGGTCTCACTGGAAAACTAGACCCTTCAATTTCCAAGCTCTCTGCTCTCGCCGACTTCACCGTCGTCCCCGGAAGAATCTACGGTCCTCTCCCTCAGTCCCTCTCCCAATTAAAAAACCTCCGGTTCCTCGGCGTCAGCCGGAACTTCATCTCCGGCGAGATCCCCTCCGGGTTGGGGCAGCTTCGCAATCTCAGAACCATCGATCTCAGCTACAACCAGCTCGCCGGAACAATTCCTCCGTCCATCGGAACCTTGCCAGAGCTAGCCAACCTGATCCTCTGCCACAACCGCCTCTCCGGTTCGGTTCCCTCGTTCGCCTCGGCTTATACCCTAACCCGCCTCGAACTCAAACACAACACTCTCTCCGGTTCGCTCGCACCGGACTCGCTCCCTCCCTCCCTACAGTACCTCTCCCTGTCATGGAACCGGCTCAGCGGACCCCTGGACCGGCTCTTAACCCGGCTCAGCCGGCTTAACTTCCTGGACCTTAGTTTGAACCAGTTCACTGGGCCCATCCCGGCCCAACTCTTCTCATTCCCGCTCGCAAATCTTCAACTCGAAAGAAACCAATTCTCCGGCCCGGTCCAACCGGTTAATGAGGTGACGATCCAGACCGTTGATCTCAGCTACAACCGGCTATCGGGTGAGGTGTCGCCCATGCTAGCGAGCGTGCAGAACCTGTACCTGAACAACAACTGGTTCACGGGGCAGGTTCCGGGCAGCTACGTGGAGCGGTTATTGGCGTCGGGTATTCAGATTCTGTATTTGCAGCACAATTACCTGACCGGAATCGCGATAAGCCCGACGGCAGAGATTCCGGTGAGCAGCACCCTGTGTTTGCAGTATAATTGCATGGTGCCACCCATTCAGACCGCGTGCCCCTTCAACGCTGGCAAGCAGAAAATCAGGCCAGCTCAGCAGTGTAACCGACGATGA 1176 0.5723 MDIASYSLLFMCFLQSVRGILDPNDFLALQSIRKSLHDVPGSNFFASWDFTADPCNFAGVFCAADRVIALNLGDPRAGSPGLTGKLDPSISKLSALADFTVVPGRIYGPLPQSLSQLKNLRFLGVSRNFISGEIPSGLGQLRNLRTIDLSYNQLAGTIPPSIGTLPELANLILCHNRLSGSVPSFASAYTLTRLELKHNTLSGSLAPDSLPPSLQYLSLSWNRLSGPLDRLLTRLSRLNFLDLSLNQFTGPIPAQLFSFPLANLQLERNQFSGPVQPVNEVTIQTVDLSYNRLSGEVSPMLASVQNLYLNNNWFTGQVPGSYVERLLASGIQILYLQHNYLTGIAISPTAEIPVSSTLCLQYNCMVPPIQTACPFNAGKQKIRPAQQCNRR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1370 391 Gene3D Ribonuclease Inhibitor 189 383 IPR032675 -
Ssu4g1370 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 3 390 - -
Ssu4g1370 391 PANTHER LRR RECEPTOR-LIKE KINASE 3 390 - -
Ssu4g1370 391 Gene3D Ribonuclease Inhibitor 24 188 IPR032675 -
Ssu4g1370 391 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Ssu4g1370 391 Pfam Leucine Rich Repeat 143 163 IPR001611 GO:0005515
Ssu4g1370 391 SUPERFAMILY L domain-like 67 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1370 Ssu-Chr4 22625873 22627048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1370 25 369 Receptor kinase-like Gene Family AT3G51740 34.160 4.40e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1370 - - gmx:100817314 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1370 4 22625873 22627048 Ssu4g1370 4 22625873 22627048 ECH
Ssu4g1370 4 22625873 22627048 Ssu7g2060 7 40811770 40812960 PCT