Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1993 ATGTCCATCGCCGCCCTCCTCGTTCTCTTCCTCGTCTCGGCGGCGATCACCGTCTCCGGCGCCCCGACGGCGTACGAGATGCTGGAGAGCTTTCACTTTCCGGAGGGCATTCTCCCGAAAGGAGTCACCGGCTACGAGCTGGACCCATCCAGCGGCAAATTCCGCGCCGATCTGAACGGTTCCTGCACTTTCTCCCTCGAAGGCTCCTACCGGTTGAGTTACCAGCCGACCATCACCGGCTACATATCCGACGGCAGGCTCACCGAACTCCGCGGGGTAAGCGTCAAGGTCCTCTTCTTCTGGCTCAACGTCCTCGACGTCGTTCGCGTCGGCGATGACCTCGATTTCTCCGTCGGCGTCGCTTCCGCTTCCTTTCCCCTCGACAACTTCTTCGTCTCCCCTCAGTGCGGTTGCGGTTTGGATTGCGATGATTTCCGGATAAGGAAACTCAAATTGGGAAACCCCTCCCTTTCCTCTGTACTGAAAACAGTATGA 495 0.5859 MSIAALLVLFLVSAAITVSGAPTAYEMLESFHFPEGILPKGVTGYELDPSSGKFRADLNGSCTFSLEGSYRLSYQPTITGYISDGRLTELRGVSVKVLFFWLNVLDVVRVGDDLDFSVGVASASFPLDNFFVSPQCGCGLDCDDFRIRKLKLGNPSLSSVLKTV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1993 164 Pfam Protein of unknown function, DUF538 24 130 IPR007493 -
Ssu7g1993 164 PANTHER F22D16.19 PROTEIN 7 160 - -
Ssu7g1993 164 PANTHER T31J12.3 PROTEIN-RELATED 7 160 IPR007493 -
Ssu7g1993 164 SUPERFAMILY At5g01610-like 5 142 IPR036758 -
Ssu7g1993 164 Gene3D - 11 139 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1993 Ssu-Chr7 39603127 39603779 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1993 - - gmx:100808207 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1993 7 39603127 39603779 Ssu7g1993 7 39603127 39603779 ECH
Ssu7g1993 7 39603127 39603779 Ssu4g0641 4 10136484 10136969 ECH