Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1992 ATGTATCTACCATATCTtacaaaaagaagacaaaacaCTCTGGGCGCGAGTCTTTTGTTGGAGTCAGAGGCGATGATGTCTTCAATTAGATTTCTGTGGATCGTGGTGGTGTCTTTGACAGTGTCATCATGCGCGTTAAGCCAACCGCAGAAGCTATCAGCGTACGATGTTCTTACGGAGTACGGGTTCCCGGTGGGTCTTCTTCCGAGAGGTGCCCTAGGCTATTCGCTGAACAGAGAGACGGGTGAGTTCGCAGTGTATTTCGACGGAAGCTGCACCTTCGACATAGAGTCGTACTCGCTCAGCTACAAGTCCACCATCACGGGAGTGATCTCCAAGGGTAGGCTCTACAAGCTCAAGGGCGTGACCGTCAAGGTCTTGCTCTTGTGGCTCAACATCGTCGAGGTCACTCGTCAGGGTAACGACATCGTTTTCTCCGTGGGCATCGCTTCCGCCAACTTTGGTGTCGAAAACTTCGTCGAGAGCCCCCAGTGCGGATGTGGCTTCGATTGCAACAGTCTCCCCCTAAACGGTGACGTTTCTTCAATTTAA 552 0.5036 MYLPYLTKRRQNTLGASLLLESEAMMSSIRFLWIVVVSLTVSSCALSQPQKLSAYDVLTEYGFPVGLLPRGALGYSLNRETGEFAVYFDGSCTFDIESYSLSYKSTITGVISKGRLYKLKGVTVKVLLLWLNIVEVTRQGNDIVFSVGIASANFGVENFVESPQCGCGFDCNSLPLNGDVSSI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1992 183 PANTHER T31J12.3 PROTEIN-RELATED 35 174 IPR007493 -
Ssu7g1992 183 PANTHER DUF538 FAMILY PROTEIN 35 174 - -
Ssu7g1992 183 Gene3D - 37 163 IPR036758 -
Ssu7g1992 183 Pfam Protein of unknown function, DUF538 54 159 IPR007493 -
Ssu7g1992 183 SUPERFAMILY At5g01610-like 25 171 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1992 Ssu-Chr7 39589285 39589836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1992 - - gmx:100500410 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0641 4 10136484 10136969 Ssu7g1992 7 39589285 39589836 PCT