Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1964 ATGCTAAAATTGCCTCATTGGAGAATTGGAGCAATGTGCGAAGAAATGTCAAGGGAGGTAGATGGTGCTGCAGAAGAACAAGGAAGACCTCTTCTCGGCCATGATCTTGATTCCTCAATTCTCATTGTCCATCGAAATGAAGACACTATCTTTCCTTTGCCATGCAATCATACAGATACACCAACTTTACCCTCTCTTTCTGTTCCTAATCAACGCCTTGCTTCTCTCGATGTCTTCCGCGGTCTAACTGTTGCGTTGATGATCTTAGTCGATAATGTGGGAAGAGCTTTCCCGTCCTTGAATCATTCTCCATGGTTTGGGGTGACACTAGCCGATTTTGTAATGCCGTTTTTTCTCTTTGTGGTTGGCGTTTCGATCGGTCTGGTATTCAAGAAAGTCTCTAGAAAACCAAATGCCACAAAAAAAGTCATATTGAGGACAATTAAGCTTTTCCTTTTGGGCTTGTTACTTCAAGGTGGGTATTTCCATGGGCGCGGCAAATTAACATATGGAGTTGATTTGAGCAAGATACGCTGGCTTGGTGTACTTCAGAGGATATCTATTGGATATTTCTTGGCCTCAATATCAGAGATTTGGCTTGTAAACCATAATATTTTGGTTGACTCACCGGCAGCTTTTGTGAAGAAATATTCCTTTCAGTGGATGTTTTCTATCTTACTTTGCTCAGTGTACCTTTGCTTGCTCTACGGTCTCTATGTTCCGAAttggaaatttaaatattctaatttgCTTTGGTCCAGTCATCTACCAGTTATTCAAAATGTTCATTGTGAAGTGAGGGGAAGTCTTGAACCTCCTTGCAATGCTGTGGGATTTATTGATAGATTAATTCTTGGTGAAGATCATATGTACCAGCGTCCTGTGTATGGAAGAACAGAGgAGTGCAGTGTCAATTCTCCTGACTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGCCTTGCACCATTTGACCCAGAGggtattttgagTTCACTGATGGCTGCGATTACTTGTTTCATGGGATTGCAATATGGGCACATAATTGTACTTTTGCAGGGCCACAAGCAGAGGGTACTTCTTTGGTCtgtgttttccttttctctattgCTAGTAGGATACATTCTGGAGATTTTAGGAATTCCTTTATCAAAAGCACTGTACACATTAAGCTACATGTGCATCACTGCAGGGGCATCAGGCTTAGTCATGACTGCTATCTATTGCATTGTTGACATAGAACATCTCAGAAAGCCTACAGTTTTACTGCAATGGGTGGGAATGAATGCTCTTGTTGTATATGCATTGGCAGCTTGTGACATTTTCCCAGCAGTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAATTTGGTTGACGCCAGTGAAGCTTTAATGCAGACCATATTTCATTCCGAAAAGTGGGGTACACTGGCCTTTTGTCATCTATCCGGTTCCCTCCACAAAGCTCCACTTCCTGTCCTGCATTACAGGAAAATGGCTACTGAGAAAAGTAATGCTGATACTTCAGACGATTTTGTTCAGTCATCATCGAGCgtaaaaaatcatgaaaaatggcACTTCGGAAGAGCATTGGCCTACAGAGCAGTTTACGGTTCTAATGGTTCTCAACGAAGAAAAGTCAGAGGTAATGCTCCCAACATATCACCAAGCAGGCTCAGCAACGTCTCAGTGGCTGCCGACAACACACAAGATAATTAA 1722 0.4088 MLKLPHWRIGAMCEEMSREVDGAAEEQGRPLLGHDLDSSILIVHRNEDTIFPLPCNHTDTPTLPSLSVPNQRLASLDVFRGLTVALMILVDNVGRAFPSLNHSPWFGVTLADFVMPFFLFVVGVSIGLVFKKVSRKPNATKKVILRTIKLFLLGLLLQGGYFHGRGKLTYGVDLSKIRWLGVLQRISIGYFLASISEIWLVNHNILVDSPAAFVKKYSFQWMFSILLCSVYLCLLYGLYVPNWKFKYSNLLWSSHLPVIQNVHCEVRGSLEPPCNAVGFIDRLILGEDHMYQRPVYGRTEECSVNSPDYGPLPPDSPGWCLAPFDPEGILSSLMAAITCFMGLQYGHIIVLLQGHKQRVLLWSVFSFSLLLVGYILEILGIPLSKALYTLSYMCITAGASGLVMTAIYCIVDIEHLRKPTVLLQWVGMNALVVYALAACDIFPAVIQGFYWHSPENNLVDASEALMQTIFHSEKWGTLAFCHLSGSLHKAPLPVLHYRKMATEKSNADTSDDFVQSSSSVKNHEKWHFGRALAYRAVYGSNGSQRRKVRGNAPNISPSRLSNVSVAADNTQDN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1964 573 PANTHER LD22376P 24 500 - -
Ssu7g1964 573 MobiDBLite consensus disorder prediction 544 573 - -
Ssu7g1964 573 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 72 196 IPR012429 -
Ssu7g1964 573 PANTHER OS05G0155700 PROTEIN 24 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1964 Ssu-Chr7 39181900 39195640 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1964 K10532 - gmx:100802361 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0983 4 15675356 15680805 Ssu7g1964 7 39181900 39195640 PCT