Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0983 ATGGATGAAGAAGCTAAGAGAATGGAAGAAGGCCTTAAATCACCGTTGAATGATGATGGAAATAAGGATGAGTTGAAGAAGCAGGAAACCATTAAAACCAGTAACGGAGGTTCTATTATTGAGCATGACAAGTCCGTCCAGCCAATAGCTGAACAGGAGCAACCGCTGGTTAAGCAGAAGACCAAGAGGGTGGCAACCCTGGATGCATTTAGGGGTCTCACCATAGTGTTGATGATACTGGTAGACGATGCTGGTGGAGCTTATCCACGCATTGATCATTCCCCGTGGAATGGATGTACTTTGGCCGATTTCGTTatgcctttctttcttttcattgttGGGGTTGCCATAGCCCTTGCACTAAAGAGAATACCCAAGATAAAGGATGCCGTAAAGAAGATAATCCTTAGGACATTGAAGCTTCTCTTCTGGGGTATAATTTTGCAAGGTGGTTACTCTCATGCCCCTGATGATCTCGAATATGGAGTTAACATGAAATTTATCCGATGGTGTGGCATTCTCCAGAGAATAGCTCTTGTATATTGTGTTGTAGCTTTAATAGAGACATTTACCACCAAGCTTAGACCCACCACGTTGGCCTCTGGATACCTATCCATCTTTACTGCTTATAGATGGCAATGGTTTGGGGGCTTCGTGGCATTTCTCATTTATATGATCACAACCTTCACCCTCTACGTTCCAGATTGGAGTTTCGTGGATCATTTTAACGGCGATGAACCAAAGAGATACACAGTCATATGTGGGATGAGAGGACACCTAGGGCCTGCATGTAACGCTGTTGGGCACGTGGACCGACAAGCGTGCACATTCAGTTCTCCACGCGATGGTCCTTTTCGTGATGATGCTCCAACTATCCTCTCTGGCACCATCGGCATCCACTATGGGCACGTCTTGATTCACTTCAAGGGTCATTCGGAGAGGCTAAAACAATGGGTCTCAATGGGGTTTGTGTTACTCATAATAGCCATCATCCTTCACTTTACCGATGCTATCCCACTTAACAAGCAATTATACAGCTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATTGTCTTCTCTGGGTTCTACATACTGATCGATGTTTGGGGGCTCCGCACTCCATTCTTGTTCTTGGAGTGGATAGGAATGAATGCTATGCTAGTGTTTGTGATGGCAGCCGAGGGCATCTTCGCAGCATTTGTAAATGGATGGTATTATGAAGATCCACGTAACTCACTAGTACACTGGATCAAGAAGCATGTGTTTGTCAATGTTTGGCACTCAGAGAGGGTGGGAACCATCTTATATGTCATCTTTGCAGAAATCACTTTCTGGGGAGTGGTTGCCGGCGTCTTACACAAATTTGGAATATATTGGAAACTATAA 1392 0.4425 MDEEAKRMEEGLKSPLNDDGNKDELKKQETIKTSNGGSIIEHDKSVQPIAEQEQPLVKQKTKRVATLDAFRGLTIVLMILVDDAGGAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKIKDAVKKIILRTLKLLFWGIILQGGYSHAPDDLEYGVNMKFIRWCGILQRIALVYCVVALIETFTTKLRPTTLASGYLSIFTAYRWQWFGGFVAFLIYMITTFTLYVPDWSFVDHFNGDEPKRYTVICGMRGHLGPACNAVGHVDRQACTFSSPRDGPFRDDAPTILSGTIGIHYGHVLIHFKGHSERLKQWVSMGFVLLIIAIILHFTDAIPLNKQLYSFSYVCFTAGAAGIVFSGFYILIDVWGLRTPFLFLEWIGMNAMLVFVMAAEGIFAAFVNGWYYEDPRNSLVHWIKKHVFVNVWHSERVGTILYVIFAEITFWGVVAGVLHKFGIYWKL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0983 463 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 63 206 IPR012429 -
Ssu4g0983 463 MobiDBLite consensus disorder prediction 1 30 - -
Ssu4g0983 463 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 1 463 - -
Ssu4g0983 463 MobiDBLite consensus disorder prediction 1 44 - -
Ssu4g0983 463 PANTHER LD22376P 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0983 Ssu-Chr4 15675356 15680805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0983 K10532 - gmx:100819967 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0983 4 15675356 15680805 Ssu4g0983 4 15675356 15680805 ECH
Ssu4g0983 4 15675356 15680805 Ssu7g1964 7 39181900 39195640 PCT