Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1962 ATGGAACAAAAGGCTGAAAACTCTATGATCATTAGCATTAGCCAAAAGGCAATTATCCCTCATGAAGCTGATAATAAAACCACCCCTTCTTCCCTCAAGAAGGGTAAGGGGTCGAAGAACTTTTTTAAGGTGGCGCTGTTCATGATGCGAGGGGGTTCTCGAAAATCCAAAGTGCTCGCTGCGGATGACGAGTCCAAGAGCACATGGAGGAAGCTCTTGGGGTCCATGAGGCCATTGCACCTACAAAGCAACGAATCTCCATtgcataacaacaacaacaataataatattcctCAATCCAAAATGATGATTACCTCAGCGCCGTCTGAAAACGGCGACGACGGGTTTGAATCCGCCTCGGAGTTTACGTACTCGCCGTCTCCGGCTAGCAGCCGTTACGCCTCGGCCGTTGGGCTAAACGAGATGGTGCAGGAGGAGGAGAACGAGAACGAGAACGAGAAGGAGGAAGAGGTTGTGAAGGAGAATAATGATGGGTACGGGGATGAGATGATTGATGCCAAGGCTGAGGAGTTCATTGCTCAGTTTTACCATCAAATGAGGTTGCAGCGTTTGGATGTTATGGATCGTCGTTACCAAGAGATAAGCATGAGGTCATTAGGCTTATGA 627 0.4641 MEQKAENSMIISISQKAIIPHEADNKTTPSSLKKGKGSKNFFKVALFMMRGGSRKSKVLAADDESKSTWRKLLGSMRPLHLQSNESPLHNNNNNNNIPQSKMMITSAPSENGDDGFESASEFTYSPSPASSRYASAVGLNEMVQEEENENENEKEEEVVKENNDGYGDEMIDAKAEEFIAQFYHQMRLQRLDVMDRRYQEISMRSLGL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1962 208 MobiDBLite consensus disorder prediction 144 165 - -
Ssu7g1962 208 PANTHER COTTON FIBER PROTEIN 1 203 - -
Ssu7g1962 208 MobiDBLite consensus disorder prediction 81 127 - -
Ssu7g1962 208 PANTHER COTTON FIBER PROTEIN 1 203 - -
Ssu7g1962 208 Coils Coil 136 164 - -
Ssu7g1962 208 Pfam Cotton fibre expressed protein 168 201 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1962 Ssu-Chr7 39162615 39163241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1962 - - gmx:100800206 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0604 4 9686129 9686731 Ssu7g1962 7 39162615 39163241 PCT