Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0604 ATGGAACAAAACCCCGAATGCGCTATCATTAACATTCCAAACACAACAACAAGCCCTTTTCATGATGACCAACCCAAACCCattcaaaagagaaagaacGGTGAAATGCACCTTCATAGGGTGGCACTCTTGGTGATGCAAGGGCGTTCCGCAAAACCAAACGTGCTTCAGGTAGATGATAGGTCCAAGAGCTTTTGGAGGAAGCTTGTGGGGTCCATGAGACCATTGCACCTTCAAAGCAACCAATCCCCGCGCTCATTTTCTCAACCCGCCACCACCTTCCAATCCTCGTCTGAATATAAAACGGATTGTGAAGGCTATGTTTCTGATTTGTTGGCGGAAGAGGAGCCTTATTCGCCATCCCCACCCAGTAGCCGTTACGCTTCATCTGTGGGGTTGAACGAACTCGTTCAGAATGATGAGGACAATGAGAAGCAGGAGGTGATTATTGAGGAGTGCGAAGAACACGTTGATGGGGATGAGAGGATTGATGCCAAGGCTGACGAGTTCATTGCTCAGTTCTACCAAGAAATGAGGCTGCAACGTTTGGATTCCGTGGATCGTCGTTACGTCGAGCGAAATCATAGGTCATTAGGCCTTTAG 603 0.471 MEQNPECAIINIPNTTTSPFHDDQPKPIQKRKNGEMHLHRVALLVMQGRSAKPNVLQVDDRSKSFWRKLVGSMRPLHLQSNQSPRSFSQPATTFQSSSEYKTDCEGYVSDLLAEEEPYSPSPPSSRYASSVGLNELVQNDEDNEKQEVIIEECEEHVDGDERIDAKADEFIAQFYQEMRLQRLDSVDRRYVERNHRSLGL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0604 200 MobiDBLite consensus disorder prediction 1 27 - -
Ssu4g0604 200 Pfam Cotton fibre expressed protein 160 196 IPR008480 -
Ssu4g0604 200 MobiDBLite consensus disorder prediction 1 23 - -
Ssu4g0604 200 PANTHER COTTON FIBER PROTEIN 1 194 - -
Ssu4g0604 200 MobiDBLite consensus disorder prediction 77 99 - -
Ssu4g0604 200 PANTHER COTTON FIBER PROTEIN 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0604 Ssu-Chr4 9686129 9686731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0604 - - gmx:102662079 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0604 4 9686129 9686731 Ssu7g1962 7 39162615 39163241 PCT