Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1954 ATGGAAACTATGTGTTTAAAAACTGGGATAGTTCCCACGATCTCCTCTTTTGGTGGGTCGGTGGACGCATGTGCCAATCCTTCTCAGGTGAGCACGGTGGGGCGCTCCGCAGCGGATAAACCGCCGCAGAAGTCGGTGTTTTCGAGATTTTCCTTTTGGCACCCTTTGGAATCTCTCTGGCCTCGGGGGAACAGCAGGTACAAAGGGCTGGCCCTCGACGACGCCGTTTTGGCGGATAACGGCGAAGGGAAGGAGGCCGTTAGAGATGACGGCGAGGGTGACGGAACGGAGACGCAGAGAAACTGGGTTTTGAAGATTTTGCACGTGAAGTCCGTGTGGGAGGGTAAACGGCGCAATGAAGAGGAGGGTGCGGCTAATGATCAAACTAATGACGATGAGGAGGAGGTGTGTGAATGTGATGGTTGCAGGGTTGATGAAGATGACGGTGACGAAGAAGAGGCTCAGTTCGATAGAGGCTCGTTTTCGAGAATGCTTCGGAGGGTATCGTTGGCCGAAGCTAGATTGTATGCTCAGATGTCACACTTGGGGAACTTGGCTTACGATATACCTAGAATCAAGCCAGGGAAACTCTTAAAACATTATGGTCTTCGTATGGTCACTTCATCgatagagaagaagaaattgGCAGCAACAACTGAAAAAGATCCCCAGAAAGTTGAAACTgatgagaaggaaaaagaagaagaaagaaaggatcCAAAGAACAGTGGATACAAGATAAGTGCAACTGCTGCTTATAATATTGCCGCCTCTGCTGCCTCTCATCTGCATTCTCAGACTAGGAGCGTATTTCCATTCAAATCCTCAAATGCTGTGATTGGTGAAGGTTCATTTGAAGGAAGCAATGAAAGCCTTGACAGTGTTAACATGATAAACACTGAGGTGGCATCTTTGATGGCAACTACTGATTCAGTGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAACAGGCTGTTGCTGATGATCTAAACTCTGCACATTCATCACCCTGTGAATGGTTCGTCTGTGATGATGACCAGAGTGGTACAAGATTTTTTGTTATTCAGgGTTCTGAGACATTGGCTTCCTGGCAAGCAAACCTACTTTTTGAGCCGATTAAATTTGAGgGGTTAGATGTCCTTGTGCACAGAGGTATATATGAGGCTGCTAAAGGGATGTATCAACAGATGTTGCCTGAAGTACAGGCTCACCTAAAATCTCGAGGTTCTCGTGCAACTTTTCGTTTCACTGGGCATTCTCTTGGTGGAAGCTTGGCGTTACTTGTGAATCTCATGCTGTTGATAAGGCAAGAAGTGCCGGTCTCCTCTCTACTTCCTGTGATAACATTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTTGAAAAGTTAGGTTTGCCTAGGAGTCATGTTCAAGCAATTACAATGCACAGAGACATAGTACCTCGAGCATTTTCTTGCAATTACCCTAACCATGTCGCAGAACTATTAAAGGCTGTCAATGGGAACTTCCGTAGTCATCCTTGTCTCAATAAACAGAAGCTACTATATGCACCAATGGGTAATCTGCTGATTCTGCAGCCAGATGAGAAATTTTCACCAAGCCATCATCTCCTGCCTTCAGGCAGTGGTCTATATCTTTTGTGTTGTCCTTTGTCTGAATCCAATGACACAGACAAGAAGCTCCGAGCTGCTCAGATGGTCTTCTTAAACTCACCTCATCCACTTGAGATATTAAGTGACCGATCTGCTTATGGATCTGGTGGAACTATACAAAGAGATCATGACATGAATTCCTACTTAAGGTCTGTGAGAACTGTGATTCGCCAAGAACTTAACCAGATTCGTAAAGCTAAGAGAGAGCATCGACCCAAGGTGTGGTGGCCTCTTGTGTTACCACGTGGAATTGATGATGCCGGCCTCATTGCTGGGAGGTCCATGATATCAGTCAATGTGGGTCAACGCCAGTCACCCTTCTCTGGCATGATACAAACTGGGAAAGTGTCCTTGAAAAGGCTCAGTAGGCTTGTTACATCCCAACATATGCATTTGTTTGTGTTGCTCTTGTTCCCTGTTCGGTTGTTACTCTTGGGAACATATAGCTTAATTAGCCTCAAGTGA 2127 0.4504 METMCLKTGIVPTISSFGGSVDACANPSQVSTVGRSAADKPPQKSVFSRFSFWHPLESLWPRGNSRYKGLALDDAVLADNGEGKEAVRDDGEGDGTETQRNWVLKILHVKSVWEGKRRNEEEGAANDQTNDDEEEVCECDGCRVDEDDGDEEEAQFDRGSFSRMLRRVSLAEARLYAQMSHLGNLAYDIPRIKPGKLLKHYGLRMVTSSIEKKKLAATTEKDPQKVETDEKEKEEERKDPKNSGYKISATAAYNIAASAASHLHSQTRSVFPFKSSNAVIGEGSFEGSNESLDSVNMINTEVASLMATTDSVTAVVAAKEEVKQAVADDLNSAHSSPCEWFVCDDDQSGTRFFVIQGSETLASWQANLLFEPIKFEGLDVLVHRGIYEAAKGMYQQMLPEVQAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRQEVPVSSLLPVITFGSPSIMCGGDSLLEKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNGNFRSHPCLNKQKLLYAPMGNLLILQPDEKFSPSHHLLPSGSGLYLLCCPLSESNDTDKKLRAAQMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLRSVRTVIRQELNQIRKAKREHRPKVWWPLVLPRGIDDAGLIAGRSMISVNVGQRQSPFSGMIQTGKVSLKRLSRLVTSQHMHLFVLLLFPVRLLLLGTYSLISLK 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1954 708 MobiDBLite consensus disorder prediction 214 243 - -
Ssu7g1954 708 MobiDBLite consensus disorder prediction 214 244 - -
Ssu7g1954 708 SUPERFAMILY alpha/beta-Hydrolases 335 522 IPR029058 -
Ssu7g1954 708 Coils Coil 603 623 - -
Ssu7g1954 708 CDD Lipase_3 336 492 - -
Ssu7g1954 708 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 35 704 - -
Ssu7g1954 708 Gene3D alpha/beta hydrolase 294 522 IPR029058 -
Ssu7g1954 708 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 35 704 IPR043367 GO:0008970
Ssu7g1954 708 Pfam Lipase (class 3) 353 490 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1954 Ssu-Chr7 38994964 38998271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1954 1 708 Acyl Lipid Metabolism Gene Families AT1G02660 56.250 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1954 - - gmx:100807834 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1954 7 38994964 38998271 Ssu7g1954 7 38994964 38998271 ECH
Ssu4g0600 4 9635420 9638476 Ssu7g1954 7 38994964 38998271 PCT