Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1948 ATGGGAAACCAAGTCTCACTTCGCCCCACAGATGCGACGGGCAAAATTGTCTTGTGGGATGGGTCAGTGCATGAATTGGAGCAATCGGTGACAGTGGCAGAGCTGATGCTGGAGCACCCAGAACAAGTGGTGGTGGAGTTGCATTCAGCCGTGAACCAGAAAAGGCCAACACCATTGCCTGCGGACAAGAAGCTAGAGATGAACAAGGTGTATCTGATGCTTCCCGTGAAGCGAGGGAAGCCTGTTGGTTTGAGCGGGGAAGAGGGTCGCCGCATTCTATTGATCCTTAACTCTGCTCTGCATTCCAAATGTCTTGTGAGTTCTTCCAAGTTTCTTCCCTGGCTTACCCGTCTGTGCCAAACTAGTACAATTGTGGAGCCTGGGGTGGCTCAGAGGAAGGAAGAAGAAACagagaaggaggaggagaggTGCCGCTTTTCTGAGTTTTTGCCGGAAATGTTAGAAGGGAGGCCGGAATATTTGAATAGGCAGTTGTCAGGGAAGGGGTGGAAGCCTACTCTGGACACCATTAAGGAGAAGAATATTGACAAAAAACTCAATCACTGGTTGTTCCTCAAGAGTTTTTAG 588 0.4779 MGNQVSLRPTDATGKIVLWDGSVHELEQSVTVAELMLEHPEQVVVELHSAVNQKRPTPLPADKKLEMNKVYLMLPVKRGKPVGLSGEEGRRILLILNSALHSKCLVSSSKFLPWLTRLCQTSTIVEPGVAQRKEEETEKEEERCRFSEFLPEMLEGRPEYLNRQLSGKGWKPTLDTIKEKNIDKKLNHWLFLKSF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1948 195 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 186 - -
Ssu7g1948 195 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 186 - -
Ssu7g1948 195 Pfam PADRE domain 1 179 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1948 Ssu-Chr7 38871147 38871734 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1948 - - gmx:100784884 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1948 7 38871147 38871734 Ssu7g1948 7 38871147 38871734 ECH
Ssu4g0597 4 9559614 9560204 Ssu7g1948 7 38871147 38871734 PCT