Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0597 ATGGGAAACCAAATAGCGAGGGATGCCACGGGGAAAATCGTTTACTGGGACGGTTCGGTTCAAAAATTTGACCAACCAGTAACCGCGGCAGAGCTCATGTTGGAGCACCCGCAACAGGTAGTGGTGGAGTTCCATTCCGCTGTGAACCAGAAAAGGCCGACGCCGCTGCCAGCTGACGAAAAGCTAGTGATGAAGAAAACGTACGTGATGGTTCCGGTGAGGCGAGGGAAGCCTGTGGGGTTGAGCAGAGAAGACAGTCGCCGCATGCTCTTGGTCGTTAATTCCTCTCTGCATTCCAAGTTTCTCGTTTCTTCTACCGGGTTTCTTGCTTGGCTTGCACGGTTCTTCCACGCGGAGGGAGAGGCTGCAATGTTGCAGAGAAAGGAGGAGGTGGAGAGCACGGAAGAGCGGTACGATTTTTCCGAGTTTTTGCCGGAAATGATAGAAGGGAGACCGGAGTATATGAGTAGACAGCTATCGGGGAAAGGGTGGAAACCTAGCTTGGACACCATCAAGGAGAAGAAGGTTAAGAGAAAACTCTCTCGCTGGTTTTTCCTCAAAAGTTTTACTGGTGCAGAGATCAagatatga 591 0.5059 MGNQIARDATGKIVYWDGSVQKFDQPVTAAELMLEHPQQVVVEFHSAVNQKRPTPLPADEKLVMKKTYVMVPVRRGKPVGLSREDSRRMLLVVNSSLHSKFLVSSTGFLAWLARFFHAEGEAAMLQRKEEVESTEERYDFSEFLPEMIEGRPEYMSRQLSGKGWKPSLDTIKEKKVKRKLSRWFFLKSFTGAEIKI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0597 196 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 183 - -
Ssu4g0597 196 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 183 - -
Ssu4g0597 196 Pfam PADRE domain 1 173 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0597 Ssu-Chr4 9559614 9560204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0597 - - gmx:100527719 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0597 4 9559614 9560204 Ssu4g0597 4 9559614 9560204 ECH
Ssu4g0597 4 9559614 9560204 Ssu7g1948 7 38871147 38871734 PCT