Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1941 ATGGCAACAATAGCTGGTAGTGTGAGTCTTTCAAGCCCTGGCAGAGTACTTGCTAAGGGATCAGACTCGGCGCAAAAGGCCCGGGCCGTGAGGTTCCCAGCGCTGTTCAGGCCCAGTCAAAAGTGGCCCGGTTCGGTTGGGATGGCGAAGGTCCGGCCCGTTCGAGCAACGCCGGAAAAGATATCCGAGAAGGTTGAGGAGAGCATAAAGAGCGCGGAGGAGGCGTGCTCGGAAAGCGCGGATGGCGCGGAATGCGCGGCGGCGTGGGATGAGGTGGAGGAACTGAGCGCGGCGGCGAGCCACGCCAGGGACAAGCAGAAGCAGTCTGACCCGCTCGAGAACTACTGCAAGGACAACCCGGAGACCGATGAGTGCCGCACCTATGATAACTGA 393 0.6081 MATIAGSVSLSSPGRVLAKGSDSAQKARAVRFPALFRPSQKWPGSVGMAKVRPVRATPEKISEKVEESIKSAEEACSESADGAECAAAWDEVEELSAAASHARDKQKQSDPLENYCKDNPETDECRTYDN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1941 130 MobiDBLite consensus disorder prediction 1 24 - -
Ssu7g1941 130 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 130 - -
Ssu7g1941 130 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 130 IPR039314 -
Ssu7g1941 130 MobiDBLite consensus disorder prediction 97 130 - -
Ssu7g1941 130 MobiDBLite consensus disorder prediction 1 18 - -
Ssu7g1941 130 SMART CP12_2 61 130 IPR003823 -
Ssu7g1941 130 Pfam CP12 domain 61 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1941 Ssu-Chr7 38768439 38768831 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1941 - - gmx:100814289 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0579 4 9276980 9277378 Ssu7g1941 7 38768439 38768831 PCT