Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0579 ATGGCAACTATGACTGGTGTAAGTTTTTCAAGCCCCAAGGTTTTGTTCAACACATCAGGCACGCCGCAAAACGCGCATGCCGTAAAGTTCGCACTCCCACTCAGTCAAGGGGTGCGACCGGTTATTATCCAGTCGGGTCGGGTGATGGCGATCCGACCCGTTCGCGCGGTGCCGGAGAGGATATCGGAGAAGGTGGAGGAGAGCATAAAGAACGCGCAGGACGCGTGCGCCGGAGACCCGACGAGCGGCGAGTGTGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCGAGGGACAAGCAAAAGGAAAAGGAATCCGACCCGCTCGAGAACTACTGCAAGGACAACCCGGAGACCATTGAGTGCAAAACCTTCGAAGACTGA 399 0.5915 MATMTGVSFSSPKVLFNTSGTPQNAHAVKFALPLSQGVRPVIIQSGRVMAIRPVRAVPERISEKVEESIKNAQDACAGDPTSGECVAAWDEVEELSAAASHARDKQKEKESDPLENYCKDNPETIECKTFED 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0579 132 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 132 - -
Ssu4g0579 132 Pfam CP12 domain 61 131 - -
Ssu4g0579 132 MobiDBLite consensus disorder prediction 97 120 - -
Ssu4g0579 132 SMART CP12_2 61 132 IPR003823 -
Ssu4g0579 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0579 Ssu-Chr4 9276980 9277378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0579 - - gmx:100812168 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0579 4 9276980 9277378 Ssu7g1941 7 38768439 38768831 PCT