Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1894 ATGAATTATGGTAAATCCTCAGTTTCCCCTCCTCATAGTCCTCTGAAGATGTCTTCCAGAGCGAGCGATATGGTTGATTTACCTAAGGGTTTGTGTGGGTGGAGTTGGAAGGAGAACAAATTGTTTGAGCTGGCTTTAGCCGTGGTAGATGAGAACCACCCAGAACGGTGGGAGGTTGTTGCAGCCATGGTTGGAGGAGAAAAGCGTGCAGGGGATGTTCAAGCGCATTATGTGTTTCTTTTGGAGGATTTAGAGCTTATAGAATCTGGAAAACTGGACCACAAACTGGGAGTGGGAGAAGCTCAGCCCTGTGTCCTAGTTGACTCTACTGAGTCCTTGTGCTTGTCTGACAAAGATACCAGCATAAGGAGGAATGTTTTTGTACTTTGCAGTACATGA 399 0.4612 MNYGKSSVSPPHSPLKMSSRASDMVDLPKGLCGWSWKENKLFELALAVVDENHPERWEVVAAMVGGEKRAGDVQAHYVFLLEDLELIESGKLDHKLGVGEAQPCVLVDSTESLCLSDKDTSIRRNVFVLCST 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1894 132 SUPERFAMILY Homeodomain-like 34 88 IPR009057 -
Ssu7g1894 132 PANTHER PROTEIN RADIALIS-LIKE 3 24 122 - -
Ssu7g1894 132 Gene3D - 33 79 - -
Ssu7g1894 132 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 24 122 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1894 Ssu-Chr7 37983986 37985797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1894 - - var:108325196 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0527 4 8338570 8338953 Ssu7g1894 7 37983986 37985797 PCT