Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0527 ATGAAATCACCTAATGTGAATGAATTACTAGGAAATCCTCAATTTCCTCAAAGTACCCTGAAGGGATCCAGAGTGAGTGAGGGTAGTGACATGGATGATTTTGCTAAGAGCTTTTGTGGATGGAGTTGGGAGGAGAACAAATTGTTTGAGCTAGCTTTGGCAGTGGTGGATGAGCAACACCCTGAACGGTGGGAACTGGTTGCAGCCATGGTTGGAGGAGAAAAAAGTGCAGGAGATGTTCAAGAGCATTATGTGATCCTTCTGGAGGATTTACACGTTATAGAATCTGGAAAACTGGACCATAAACTTGGAGAAGTTAAGCCTGCTGTTCTTGTTGAGTGTAAGGAGTCCATGTGCTTGTCCCACAATGATACAAGCATGTAA 384 0.4349 MKSPNVNELLGNPQFPQSTLKGSRVSEGSDMDDFAKSFCGWSWEENKLFELALAVVDEQHPERWELVAAMVGGEKSAGDVQEHYVILLEDLHVIESGKLDHKLGEVKPAVLVECKESMCLSHNDTSM 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0527 127 MobiDBLite consensus disorder prediction 1 25 - -
Ssu4g0527 127 Gene3D - 40 89 - -
Ssu4g0527 127 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 31 127 IPR044636 GO:0003700
Ssu4g0527 127 SUPERFAMILY Homeodomain-like 41 96 IPR009057 -
Ssu4g0527 127 MobiDBLite consensus disorder prediction 1 28 - -
Ssu4g0527 127 PANTHER PROTEIN RADIALIS-LIKE 3 31 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0527 Ssu-Chr4 8338570 8338953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0527 - - gmx:106798110 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0527 4 8338570 8338953 Ssu7g1894 7 37983986 37985797 PCT