Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1873 ATGGATACTGCTCACAGGACTGGTGGAGTCAAGTACGAGTGCTTGCTTTTTGagtATATGTTAGAACACTTGCATATTGAAGAGAGTGAAGTGCCAAAGATGTGCCTGGATTTGTATAGGGAATACGGGACAACTATGGCAGGATTAAAGGTCCTTGGTTACGAGTTTGACAATGACGAGTTTCATGCTTACGTGCATGGAAGATTACCATACGAGAAACTGAAGCCTGATCCAGTATTAAGGAACCTTCTGCTTTCCATGCCTCAGCGTAAAATAATATTCACCAATGCAGATCACGGACATGCAGTTCAAGTTCTCAACAGATTGGGTTTGGAAGATTGTTTTGAGGGCATCATATATTTTGAAACGCTTAATCCTCCCAAACAAATCAATCACATGGATGTACCGGATGATAATCATGTGCTCACAGATTTAACAGAGTGTGGATGTTTCAATTCCCACCCACAAATTCTCTGCAAACCATCCGTGGAAGCATTTGAAGCTGCTATTCGGATTGCTGATGTGGATCCAAAGAAAACAATTTTCTTTGATGACAGTGTTAGAAATGTTGCAAGTGCAAAAATAGCTGGACTTCACACTGTTATAGTGGGCCATTCAGATTTGGTGCCTGGCGCCGATCATGCCCTGAGTAGCATTCATAATATCAAAGAAGCATTACCTGAAATATGGGAGATTGAAGAAGGCAACCAACAGCAAAAGATTCAAGCCCCAAGAGTTGAAACCATGGTCCTAGCTTAA 759 0.415 MDTAHRTGGVKYECLLFEYMLEHLHIEESEVPKMCLDLYREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNADHGHAVQVLNRLGLEDCFEGIIYFETLNPPKQINHMDVPDDNHVLTDLTECGCFNSHPQILCKPSVEAFEAAIRIADVDPKKTIFFDDSVRNVASAKIAGLHTVIVGHSDLVPGADHALSSIHNIKEALPEIWEIEEGNQQQKIQAPRVETMVLA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1873 252 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 17 203 IPR010237 -
Ssu7g1873 252 PANTHER OS07G0634400 PROTEIN 17 252 - -
Ssu7g1873 252 SUPERFAMILY HAD-like 23 207 IPR036412 -
Ssu7g1873 252 Gene3D - 54 230 IPR023214 -
Ssu7g1873 252 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 17 252 - -
Ssu7g1873 252 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 158 203 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1873 Ssu-Chr7 37579650 37581634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1873 K18551 - gmx:100814291 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0507 4 8008761 8009868 Ssu7g1873 7 37579650 37581634 PCT