Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0507 ATGTTGAAACACCTACATATGGAAGAAAGTGAAGTACCAAAGATTTGCCTGGATTTGTACAGGGAATATGGGACAACTATGGCAGGACTAAAGGCCTTAGGGTATGAGTTTGACAATGATGAATTTCATGCCTATGTGCATGGAAGATTACCATACGAGAAACTAAAGCCAGATCCAGTGTTAAGGAATCTTCTGCTTTCCATGCCTCAGCGTAAAATAGTATTCACTAATGCAGATCAAGCACACGCGCACCAAATTCTCGACAGATTAGGCTTGAAAGATTGTTTTGATGGCATCATATGCTTTGAAACGCTTAATCCTCCTAATTACACGGATGTACCTACTGATAATCACGTGCTAACATGGAGTAACTCGTTTAACAAAGCCTGTGATAAAATAGAGAGTGAGAGTGGATGTTTCAACTCCAAGACACAAATCCTCTGCAAACCCTCTGTGGAAGCCATTGAAGCTGCTATTCAGGTTGCTAATGTAGATCCAAGGAAAATGCTGTTTTTTGATGACAGTGCTAGAAATATTGCAAGTGGGAAAGCTGCTGGACTTGACACAGTTATTGTGGGACGCTCAGATTTGGTGCCTGGTGCTGACCATGCACTAAACAGCATTCACAATATCAAAGAAGCATTACCCGAAATATGGGAGGTTGAGGGAGACCAACAGCTAATGATCCAACCCCCAGCAGTTGAAACCATGGTTCTTGCATAG 723 0.4205 MLKHLHMEESEVPKICLDLYREYGTTMAGLKALGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLLSMPQRKIVFTNADQAHAHQILDRLGLKDCFDGIICFETLNPPNYTDVPTDNHVLTWSNSFNKACDKIESESGCFNSKTQILCKPSVEAIEAAIQVANVDPRKMLFFDDSARNIASGKAAGLDTVIVGRSDLVPGADHALNSIHNIKEALPEIWEVEGDQQLMIQPPAVETMVLA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0507 240 PANTHER OS07G0634400 PROTEIN 1 240 - -
Ssu4g0507 240 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 240 - -
Ssu4g0507 240 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 146 192 IPR006439 -
Ssu4g0507 240 Gene3D - 33 219 IPR023214 -
Ssu4g0507 240 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 1 192 IPR010237 -
Ssu4g0507 240 Pfam HAD-hyrolase-like 149 194 - -
Ssu4g0507 240 SUPERFAMILY HAD-like 7 196 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0507 Ssu-Chr4 8008761 8009868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0507 K18551 - gmx:100775435 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0507 4 8008761 8009868 Ssu7g1873 7 37579650 37581634 PCT