Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1834 ATGGAGCACCAAAACGGCGACGCTGTTTCCCATCCCCACGTTTCCAAGAAGATAAAACTCTGTTTCACGAATTCCCCCTTTATCAGCGACACGGAGATCCAATCGGAATTCTCCCACCACGACCCCGGCGTGGCGCGGCTCAACAACGGCGCGTTCGGGTGCTGCCCCGCCTCCGTCATCGCGGCTCAGCGGCAGTGGCAGCTGAAGAACCTCCGGCAGCCGGACCACTTCTACTTCAACGACCTCAAGCAGGGCCTCCTCCGCTCCCGCACCATCATCAAGGACCTCGTCAACGCGGAACACGTGGACGAGATCTCCCTCGTGGACAACGCCTCCACCGCCACCGCCATCGTGCTCCAGCAGGCCGCCTGGGCCTTCCACGAGGGAAGGTTCCAGAAGGGCGACGTCGTCCTCATGCTCCACTACGCCTACGGCGCCGTCAAGAAGGCCATCGAGGCCTACGTGGCGCGCGCCGGCGGCGCCGTCGTCGAGGTCCCCCTCCCCTTCCCCGTCACCTCCGACCACGACGTCGTCCGCGAGTTCCGGAAGGCCGTTGAGAAGGGAAAGTCCCGAGGTAACAGAATTCGTTTGGCGGTTATCGATCACGTGACTTCCATGCCCAGCGTCGTGATTCCCGTTAAGGAGTTAGTTGCGATTTGCAGGGAGGAAGGGGTGGAGCAGGTTTTTGTCGACGCGGCGCACGCGATTGGGTGCACGCGCGTGGATATGCAGGAGATTGGGGCGGATTTCTACACCAGCAATTTGCACAAGTGGTTCTTCTGCCCTCCTTCCGTTGCGTTTCTCTACGCTCGCGCGTCGCCCAAGGCGCGTGACCTACACCACCCGGTGGTGTCTCACGAGTACGGGAACGGGTTGGCGGTGGAGAGTTCTTGGACTGGGAATAGGGATTATAGTGCACAGTTGGTGGTTCCTGCGGTTATGGAGTTCGTGAATAGGTTCGAGGGCGGAATTGAAGGGATAAGGAAGAGGAACCATGATAGGGTTGTGGAGATGGGGGAGATGCTGGTGGATGCTTGGGGGACTCATCTTGGGACTCCTCCTCATATGAGTGCTAGCATGGTGATGGTGGGTTTGCCTCCTTGCTTTGGGATTAGGACTGAGTCTGATGCTCTCAAACTTAGGACGCATTTGAGGGATGATTTTGGGGTTGAAGTTCCCATTTATTTTCGTGGAGGGGAACTTGGGTCCGTTACTGGATATGCCCGAATTTCTCGTCAGGTTTATAACAAGGTTGCTGACTACTATAAGTTCAGGGATGCCATTAACCAACTTGTGCGAGATGGCTTTACTTGTGATCTGCTTTCCGCTTGA 1332 0.5728 MEHQNGDAVSHPHVSKKIKLCFTNSPFISDTEIQSEFSHHDPGVARLNNGAFGCCPASVIAAQRQWQLKNLRQPDHFYFNDLKQGLLRSRTIIKDLVNAEHVDEISLVDNASTATAIVLQQAAWAFHEGRFQKGDVVLMLHYAYGAVKKAIEAYVARAGGAVVEVPLPFPVTSDHDVVREFRKAVEKGKSRGNRIRLAVIDHVTSMPSVVIPVKELVAICREEGVEQVFVDAAHAIGCTRVDMQEIGADFYTSNLHKWFFCPPSVAFLYARASPKARDLHHPVVSHEYGNGLAVESSWTGNRDYSAQLVVPAVMEFVNRFEGGIEGIRKRNHDRVVEMGEMLVDAWGTHLGTPPHMSASMVMVGLPPCFGIRTESDALKLRTHLRDDFGVEVPIYFRGGELGSVTGYARISRQVYNKVADYYKFRDAINQLVRDGFTCDLLSA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1834 443 SUPERFAMILY PLP-dependent transferases 37 433 IPR015424 -
Ssu7g1834 443 Pfam Aminotransferase class-V 76 273 IPR000192 -
Ssu7g1834 443 Gene3D - 60 325 IPR015421 GO:0003824
Ssu7g1834 443 PANTHER L-CYSTEINE DESULFHYDRASE 5 443 - -
Ssu7g1834 443 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 5 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1834 Ssu-Chr7 37000163 37001494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1834 K22207 - gmx:100796732 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0474 4 7544687 7546051 Ssu7g1834 7 37000163 37001494 PCT