Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1817 ATGGCCCGTGCTGATATGACCACTGTCAAAGCCAACGTCACCGACGCTCAAGCCAAGGCCGCCGGCGGTCGTGCCTACGTCACCTTCCTCGCCGGGAACGGCGACTACGTCAAAGGTGTCGTTGGCTTGGCCAAAGGTCTGAGAAAGGTGAAGAGCATGTACCCTCTGGTGGTTGCAGTGTTGCCTGATGTTCCCGAAGAGCACCGCAACATTCTCACCTCCCAAGGCTGCATTGTCAGAGAAATTGAGCCCGTGTACCCCCCCGAGAACCAGACCCAGTTTGCCATGGCGTATTACGTCATCAACTATTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATTTACCTAGACGGTGATATCCAAGTTTTTGACAACATCGATCACTTGTTCGACTTGCCTGATAATTACTTCTACGCAGTGATGGACTGTTTCTGCGAGCCCACTTGGGCCCACACCCCGCAGTATCAGATCGGTTACTGCCAGCAGTGCCCTGATAAGGTTCAATGGCCCGCTGATTTTGGGCCCAAGCCTCCTCTCTATTTTAATGCTGGCATGTTTGTTTATGAGCCCAATTTAGCTACCTACCGTGACCTACTTCAAACAGTGCAAGTCACCAAGCCCACTTCCTTTGCTGAACAGGATTTTTTGAACATGTACTTCAAGGACAAATATAGGCCAATACCTAATGTCTATAATCTTGTGCTGGCCATGATGTGGCGTCATCCTGAGAATGTTGAGCTTGACAAAGTTAAAGTGGTTCACTACTGTGCTGCTGGATCGAAGCCTTGGAGGTACACTGGGAAAGAGGAGAATATGGACAGAGAAGATATCAAGATGTTAGTGAAGAAGTGGTGGGATATATATGAGGATGAGACTTTGGACTACAACAATCCCCTCAACGTGGATAGGTTCGCCGCGGCGCTTTTGGAGGCTGGTGGAGTCAAGTTTGTTCGTGCCCCTTCCGCCGCTTAG 984 0.499 MARADMTTVKANVTDAQAKAAGGRAYVTFLAGNGDYVKGVVGLAKGLRKVKSMYPLVVAVLPDVPEEHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDNYFYAVMDCFCEPTWAHTPQYQIGYCQQCPDKVQWPADFGPKPPLYFNAGMFVYEPNLATYRDLLQTVQVTKPTSFAEQDFLNMYFKDKYRPIPNVYNLVLAMMWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYEDETLDYNNPLNVDRFAAALLEAGGVKFVRAPSAA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1817 327 PANTHER GALACTINOL SYNTHASE 2 13 327 IPR030515 GO:0006012|GO:0047216
Ssu7g1817 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 13 327 - -
Ssu7g1817 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 297 IPR029044 -
Ssu7g1817 327 CDD GT8_Glycogenin 24 294 - -
Ssu7g1817 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 300 IPR029044 -
Ssu7g1817 327 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1817 Ssu-Chr7 36752402 36753674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1817 9 327 Glycosyltransferase AT1G56600 75.831 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1817 K18819 - gmx:548050 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1817 7 36752402 36753674 Ssu7g1817 7 36752402 36753674 ECH
Ssu4g0452 4 7348300 7352294 Ssu7g1817 7 36752402 36753674 PCT