Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1816 ATGTCCTCTTCAAGGTTTTGTTTATCCAATTGTGCTCTTAGCATATCTTCCTATGTAAGCCATGTTCACTTCATTAAggcattgttttttatttgtatctgGCAGGCTGCAGCCTTGGCATTTTACATTCTCTCGGCCATCTTTATTGATAACTTTGTCATCATTTTTGTGGTGACTGTCCTTCTCGCCGCCCTTGATTTTTGGGTAGTTAAGAATGTGAGTGGGCGGATTTTAGTTGGTCTGAGGTGGTGGAATGAAATTAATGATCTGGGTGAGAGTGTTTGGAAATTTGAATGTCTTGACCATGAGTCATTGGCTCGGATGAACAAGAAAGATTCGTGGCTTTTCTGGTGGACCCTGTACCTTACGGCTATTGCATGGATTCTGCTGGCAATATTCTCAATCATAAGGCTTCAAGCTGATTATCTCCTTGTTGTAGGAGTTTGTCTGACCCTCAGCATTGCAAATATTGTTGGCTTTACCAAATGCAAAAAAGATGCCAAGAAGCAGATTCAACAATTTGCCTCTCAGACAATTGCCTCCCGGTTCTCATCTACCCTACAGTCAGCATTCAGTGTCGTCTAA 585 0.4051 MSSSRFCLSNCALSISSYVSHVHFIKALFFICIWQAAALAFYILSAIFIDNFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFECLDHESLARMNKKDSWLFWWTLYLTAIAWILLAIFSIIRLQADYLLVVGVCLTLSIANIVGFTKCKKDAKKQIQQFASQTIASRFSSTLQSAFSVV 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1816 194 PANTHER UNCHARACTERIZED 26 194 IPR008564 GO:0016021
Ssu7g1816 194 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 26 194 - -
Ssu7g1816 194 Pfam Eukaryotic protein of unknown function (DUF846) 27 163 IPR008564 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1816 Ssu-Chr7 36739540 36742461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1816 - - gmx:100527655 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1816 7 36739540 36742461 Ssu7g1816 7 36739540 36742461 ECH
Ssu4g0449 4 7318951 7323462 Ssu7g1816 7 36739540 36742461 PCT