Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0449 ATGTTCTCTTCAAGGCTATGGCTTTGGCATTTTACATTCTCCGCCCTCTTTATTGATATCTTTGTCATCATTTTTGTGATGACTGTCCTTCTTGCCGCTCTTGAGTTTTGGGTAGTCAAGAATGTGAGTGGGAGAATTTTAGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTTTGGAAATTTGAATGTCTTGATCAACAGTCATTGGCCTGGATGAACAAGAAAGATTCATGGCTTTTTTGGTGGACGCTTTACCTTACAGCAATTGCATGGATTGTGCTGGCAATATTCTCGCTTGTAAGGCTTCAAGCTAATTACCTCCTAGTTGTAGGAGTTTGTTTGACCCTCAGTATTGCAAATATTGTTGGTTTTACCAAATGCCAAAAAGGTATGCTAGTTTGTTGA 420 0.3929 MFSSRLWLWHFTFSALFIDIFVIIFVMTVLLAALEFWVVKNVSGRILVGLRWWNEINDLGESVWKFECLDQQSLAWMNKKDSWLFWWTLYLTAIAWIVLAIFSLVRLQANYLLVVGVCLTLSIANIVGFTKCQKGMLVC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0449 139 PANTHER UNCHARACTERIZED 10 134 IPR008564 GO:0016021
Ssu4g0449 139 Pfam Eukaryotic protein of unknown function (DUF846) 10 132 IPR008564 GO:0016021
Ssu4g0449 139 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 10 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0449 Ssu-Chr4 7318951 7323462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0449 - - gmx:100795312 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0449 4 7318951 7323462 Ssu7g1816 7 36739540 36742461 PCT