Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1814 ATGATGAACACAATTTCCCTTATTCGCAACCGCGCCATGAAATCCGCTCGCAGGATTCTCATAGGTTCCagaaattcttcattttttgggTTCCCACCTGCAAAACCTGAACACACTCTTTCCATCGCTAACAATTCGCCGAAACCTCGTTTCAATCATGACCACACCAATCACCACCCTTTCCAAAAGGGTGGTGCTCAGAAAGTTTTTGGCTTACCCTCCTCGAATTTTGCCCCTTTATCAAGGTCTTTTAGTTTAAGCACATCGAACGAGGTTCGAAATTTCTCAACCTCTGTTGAGACCCGTGTCAATGACAATAATTTTGAGAGGATTTACGTACAGGGTGCCATGAATAATGTGAAGCCATTGGTGGTGGTGGAAAGTGTTCATAAGGATGATGAGAATGTTGTAGGTGAGAAAAGTTTAGGTGGTGATGTGAGGGTGACTGTGGGCAAGACTAAAGGGGAGGACTCAGAGGTGGAAAAACAAGCATGGAAATTGTTGCAGGGAGCTGTGGTGAGTTATTGTGGCAACCCTCTGGGGACTGTGGCTGCAAATGATCCTGGTGACAAGCTACCCTTGAATTATGATCAGGTCTTTATTAGGGATTTTATCCCGTCAGCACTTGCTTTCTTGCTTAGAGGAGAAAATGAGATTGTTAAGAACTTTCTTCTTCATACCTTGCAGTTGCAGAGTTGGGAGAAAACAGTGGACTGCTACAGTCCAGGGCAGGGCTTGATGCCTGCTAGTTTCAAAGTAAGAACTGTAGCTCTTGATGAAGATAATCATGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTCTTGCGGGCTTATGGGAAGCTCACTGGTGACTGCAGCTTGCTAGAAAGGGTGGATGTTCAAACAGGCTTAAAAATGATCCTTAACTTGTGTTTAACCGATGGTTTTGATATGTTTCCTTCTCTGCTAGTCACTGATGGGTCTTGCATGATAGACAGGCGGATGGGCATTCATGGTCACCCCCTTGAGATCCAAGCGTTATTTTACTCAGCTCTTCGCTGCTCGCGTGAGATGCTTGTGGTAACTGATGGAACCAATAATCTTATTAGAGCCATTAACAACAGACTCAGTGCACTGTCATTTCACATTAGAGAATATTATTGGGTGGATATGAAAAAGATCAATGAAATATACAGGTATAAAACTGAAGAGTACTCCATGGATGCcatcaacaaattcaacatcTATCCAGAACAAATTCCATTGTGGTTAATGGATTGGATTCCAGAAGAAGGTGGATATCTGATTGGGAATCTGCAGCCAGCTCACATGGACTTCAGGTTTTTCACACTTGGAAATCTTTGGTCTATCGTCTCATCATTGGGCACCCCAAGACAGAACCAGGCTCTTTTAAATCTGATAGAAGCAAAATGGGATGATCTTGTGGGCCATATGCCTCTTAAGATATGTTATCCTGCCTTGGATAATGAAGAGTGGTGCATAATTACTGGCTGCGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTCTATGGCAGTTCACGCTGGCATGCATTAAAATGGGGAGAATTGAACTTGCCCAGAAGGCCGTTGCTTTGGCTGAGAAAAGACTGCCAGTTGATTCTTGGCCTGAATACTATGATACACGTACTggaaaatttattggaaaacaAGCTCGGATGTATCAAACATGGACCATAGCTGGTTTCCTTACGTCCAAGATGCTTTTGAAGAATCCTGAGATGGCATCCATGTTATTCTGGGAGGAGGATTACGAGCTTCTTGACATATGTGTTTGTGGACTTAGCAAGAGTGGCAGGAAAAGGTGTTCCCGTGGTGCCGCAAGGTCTCAGATTCTTGTATGA 1935 0.4284 MMNTISLIRNRAMKSARRILIGSRNSSFFGFPPAKPEHTLSIANNSPKPRFNHDHTNHHPFQKGGAQKVFGLPSSNFAPLSRSFSLSTSNEVRNFSTSVETRVNDNNFERIYVQGAMNNVKPLVVVESVHKDDENVVGEKSLGGDVRVTVGKTKGEDSEVEKQAWKLLQGAVVSYCGNPLGTVAANDPGDKLPLNYDQVFIRDFIPSALAFLLRGENEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDEDNHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDCSLLERVDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLVVTDGTNNLIRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSMDAINKFNIYPEQIPLWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNQALLNLIEAKWDDLVGHMPLKICYPALDNEEWCIITGCDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAVALAEKRLPVDSWPEYYDTRTGKFIGKQARMYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICVCGLSKSGRKRCSRGAARSQILV 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1814 644 Pfam Alkaline and neutral invertase 164 603 IPR024746 GO:0033926
Ssu7g1814 644 PANTHER - 82 644 IPR024746 GO:0033926
Ssu7g1814 644 Gene3D - 195 594 IPR012341 GO:0005975
Ssu7g1814 644 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 82 644 - -
Ssu7g1814 644 SUPERFAMILY Six-hairpin glycosidases 163 595 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1814 Ssu-Chr7 36728827 36732764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1814 - - gmx:100785091 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1814 7 36728827 36732764 Ssu7g1814 7 36728827 36732764 ECH
Ssu4g0446 4 7303956 7307297 Ssu7g1814 7 36728827 36732764 PCT