Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0446 ATGATCGCCATCAACCTTATTTGCATTTGCACCATGAAACCATCCCCTAAGATCCTCATTGGTTACAAGAATTCATCGTTTCTTGCAAGATGTCACCATACTCTTACTATGTCTATGTCTAACTCGAGCACGTGTGGCATCAATCTTGATCACAACACCATGCACTGCCCTTTCCACACGCGGGAGTTTAGACGCATAATGCATGGTAGCCAACAAGTTTTCGGGTTACCCTCTTCGAGTTTTGGCCAATCAAGGTCCCTCAGTTTAAGTGCAACAAGAACAATAAAACGGGGTGTGTCTGCCATTGCTGGAGTTGACTTCAACTTCAAGGCTCGTGACTTCTCAGGCTCCTTCGAGACACGTGTCAATGACAATAACCATGGTGAGATGGTTTACGTAAAGGGTGGCATGAATGTGAAGCCAACAGTGGTAGAAAGTGTTGGTGAAGATGAGGATAATGTTGAGGAAGAGTCTCGGTTAGAAGTTGGTGAGGAAGATGAGAACACAGAGAATGCAGGTGGTTTAAAGAATGTAGATGAGGCCAAGAACGTAGAATTGGAGACAGAAGTGGAGAAAGAGGCATGGAAGTTATTGCAAGAGGCACTTGTGACGTATTGTGACAGCCCTGTGGGGACGGTGGCAGCAAATAGTTCAGATAGCCAGCAAGCTTTGAATTATGATCAGGTTTTCATTCGGGATTTTATCCCTTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAAAGGAGATTGTCAAGAACTTTCTCCTTCATACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGACTGCTATAGCCCAGGGCAGGGCTTGATGCCTGCTAGTTTCAAAGTTAAAACTAAGGAACTTGATCAAGGAAAGACAGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATCCTGCTGCGGGCTTATGGGAAGCTCACTGGGGACTACAGCTTGCAAGAAAGATTGGATGTTCAAACAGGCTTAAGAATGATCCTTAACTTGTGTTTAACAGATGGATTCGATATGTTTCCTTCCCTGTTAGTAACTGATGGATCTTGCATGATAGACAGGAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAAGCTTTATTTTACTCAGCTCTTCGCTCGGCCCGTGAGATGATTGCCGAAGATGAAAAATCCAAGAATCTGGCTGGAGAAATTAACAACAGACTCAGTGCACTATCATTCCACATTAGAGAATACTATTGGTTGGATATGCAAAAGATAAATGAGATATACAGGTACAAAACAGAAGAGTACTCATTGGATGCCACAAACAAGTTCAACATCTATCCAGAACAAATCCCTTCGTGGCTAATGGATTGGATTCCAGAGGAAGGAGGATATCTGTTAGGGAATCTGCAGCCAGCTCACATGGACTTCAGGTTTTTCATGCTTGGAAATATTTGGTCTGTTGTTTCCTCTTTGGGCACCCCAAGGCAGAATGATGCTATTTTGAATCTGATAGAAGCAAAATGGGGTGATCTCGTGGGGCTAATGCCTCTTAAGATATGTTATCCTGCCTTGGAGCAAGAAGAATGGCGAGTAATTACTGGCTGCGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCCACCCTTCTGTGgcagTTCACACTTGCATGCATGAAAATGGAGAGAACTGAATTAGCTGAGAAAGCAGTTGCTTTGGCTGAGAAAAGACTGCCACGTGATTCCTGGCCTGAATATTATGACACCCGCTCAGCACGATTTATTGGCAAACAAGCCCGGCTTTATCAAACATGGACTTTAGCTGGGTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTAAACCGGCCTCCTTGTTATCCTGGGATGAGGATTTTGAGATTCTTGAGACGTGTGTTTGTTTACTTAACAAGAGTGGCAGGACCAAATGCTCCCGTGATGCTGCAAAGTCTCAGATTCTCGTGTGA 2025 0.4425 MIAINLICICTMKPSPKILIGYKNSSFLARCHHTLTMSMSNSSTCGINLDHNTMHCPFHTREFRRIMHGSQQVFGLPSSSFGQSRSLSLSATRTIKRGVSAIAGVDFNFKARDFSGSFETRVNDNNHGEMVYVKGGMNVKPTVVESVGEDEDNVEEESRLEVGEEDENTENAGGLKNVDEAKNVELETEVEKEAWKLLQEALVTYCDSPVGTVAANSSDSQQALNYDQVFIRDFIPSALAFLLKGEKEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTKELDQGKTEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERLDVQTGLRMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMIAEDEKSKNLAGEINNRLSALSFHIREYYWLDMQKINEIYRYKTEEYSLDATNKFNIYPEQIPSWLMDWIPEEGGYLLGNLQPAHMDFRFFMLGNIWSVVSSLGTPRQNDAILNLIEAKWGDLVGLMPLKICYPALEQEEWRVITGCDPKNTPWSYHNGGSWPTLLWQFTLACMKMERTELAEKAVALAEKRLPRDSWPEYYDTRSARFIGKQARLYQTWTLAGFLASKMLLKNPKPASLLSWDEDFEILETCVCLLNKSGRTKCSRDAAKSQILV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0446 674 PANTHER ALKALINE/NEUTRAL INVERTASE 5 674 - -
Ssu4g0446 674 MobiDBLite consensus disorder prediction 146 174 - -
Ssu4g0446 674 SUPERFAMILY Six-hairpin glycosidases 192 639 IPR008928 GO:0005975
Ssu4g0446 674 PANTHER - 5 674 IPR024746 GO:0033926
Ssu4g0446 674 MobiDBLite consensus disorder prediction 148 164 - -
Ssu4g0446 674 Gene3D - 210 621 IPR012341 GO:0005975
Ssu4g0446 674 Pfam Alkaline and neutral invertase 194 633 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0446 Ssu-Chr4 7303956 7307297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0446 - - gmx:100794258 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0446 4 7303956 7307297 Ssu7g1814 7 36728827 36732764 PCT