Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1811 atgtCTCTAGTGACTGCAGAGATCAAGGCCAAATCAGAGGTGTACCATGGAGATGAACTCTGCCAAGAAAAGTCCAAGTTTCTGTTGAAGGAAGTGGGGCTACCCAATGGCCTTTTGCCCTTGAAGGACATTGAGGAATGCGGGTACGAGAAGGAAAGTGGGTTCGTGTGGCTGAAGCAGAAGAAGAGCATAAGCCACAAGTTTGACAAGATTGGGAAGCTAGTGTCTTATGCTCCTGTGATCACTGCCTATGTTGAGGTCGGTAAGATCAAGAAGCTGACTGGGGTGAAGACCAAGGAGCTCTTGGTTTGGATCACACTGAGTGACATCTATGTTGATGATCCACCCACTGGGAAGATCACATTCAAGACCCCTTCAGGGCTTTTCAGGACATTCCCAGTCTCAGCTTTTGAGATTGAAGAGCCAGTTAAGGAAGTGAAGAAGCTGGAAGAACAAAAGGAAGTCAAACAAGTTGCTAGTGCTGTTGAAGTCCAAGAGGTTTGA 504 0.4663 MSLVTAEIKAKSEVYHGDELCQEKSKFLLKEVGLPNGLLPLKDIEECGYEKESGFVWLKQKKSISHKFDKIGKLVSYAPVITAYVEVGKIKKLTGVKTKELLVWITLSDIYVDDPPTGKITFKTPSGLFRTFPVSAFEIEEPVKEVKKLEEQKEVKQVASAVEVQEV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1811 167 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
Ssu7g1811 167 PANTHER PLANT/F25P12-18 PROTEIN 2 159 - -
Ssu7g1811 167 SUPERFAMILY At5g01610-like 3 145 IPR036758 -
Ssu7g1811 167 PANTHER T31J12.3 PROTEIN-RELATED 2 159 IPR007493 -
Ssu7g1811 167 Gene3D - 5 149 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1811 Ssu-Chr7 36697408 36697911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1811 - - gmx:100500427 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1811 7 36697408 36697911 Ssu7g1811 7 36697408 36697911 ECH
Ssu4g0444 4 7295357 7295842 Ssu7g1811 7 36697408 36697911 PCT