Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1794 ATGGGGTCTCTGGTTGCTGAAACAGCAAAGAAGAAAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTATAATCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTCTCTGGGGGGCTTATGTATGTCTTTGGGGGCTGTTGTGGGGGACTACATTTCGGAGATGTTCTATGTTTGGATGTTAACAAAATGGACTGGAGCAAGCTTGCTACCACGGGTGAAAAGCCAGGCCCTAGAGATAGCCATAGTGCTGTTCTTGTAGGGCATAGAATGATAGTGTTCGGGGGCACAAATGGGTTCAAGAAGGTGAATGACACTCATATATTGGACCTTGTTACTAAAGAGTGGGTTCGTCCTAACTGTGAAGGGACTCCTCCTTCTCCCCGGGAAAGTCACACTGCCACTCTAGTTGGGGACGAAAGACTAGTGATTTTTGGTGGCAGTGGAGAAGGTGACGCAAACTATTTAAATGATTTGCATATTCTAGACCGTCGAACCATGAGGTGGACTTCCCCTGCGGTTAAAGGTGATTTGCCTGTCCCTAGGGACAGTCACAGCACTCTTGCAATTGGGAACAAGCTTATTGTGTATGGTGGAGACTGTGGTGATCAGTATCAGGGTGATGTTAATATGCTTGACATGGACACAATGACTTGGTCAAGGTTGAAAATTCAAGGCTCTTCCCCAGGAGTCAGGGCAGGTCATACGGCTGTGAGTATTGGAACCAAGGGCTACATCATTGGAGGGGTGGGAGATAAACGTTATTATAATGACATATGGGTCTTTGATATCTGCACCTGTTCGTGGACTCAGCTTGATATTCGTGGTCCACCGCCACAGGGGCGGTTTTCCCATACAGCTGTTGTTGCAGACATGGATATTGTCATATATGGCGGGTGTGGGGAAGATGAACGTCCTTTGAACGAATTGTTAGTGTTGCAGCTTGGAGCAGAGCACCCAAATGGAGACCACAACATTTCCATGTGCAAAGTTTTTGGAACTTATTGGAATCAAGAAAAGAGGACCATACCTGGAGGAGCAGATACCAACTCGACAACTCCACGCACGGGGAATAATATGGAAGTCTTAGGTAAATGGGCTTATGAAGTTGTATCGGATAAAGGGCAACCTTGTCACTTTGATTTTGGCACTTCACAACAGAAGAGGAGGAGAATTGCTGTTGCAAAGGTGTGGGATGTTGAATCAGAACAGGAAGAACATTCTCTTTCACTGTCTCAGCACTCATCTCCATCTCAATCTGATCATGAACAGACCCCACGTCAAAAAGGAAATGTTTCTGTCTTAGATTCTCAGCGGTATCATTGGTTCAAACAGATGAATAAAGGTCCAAGCAATTGCCAGCTTGACAATGTCTCAAGTAATAACACAGTTTTGAAGAATATCACACAAAGAAGTCTTCATCTCATGGAACATCAACCAAAACAAGAACAGTATGTTCATGTTGATCAGGATAGAAAAGGAGCTCGACACACCAAACATCTGATTGGTGCTGAAGTTCGGGGGAAAGTTGATGGAGCCTTTGATTCAGGGTTACTCATGACCGCAGCTGTGAATGGAAGAGTTTTCAGAGGAGTCTTATTTGCTCCAGGAGCAGGAGTGTTTTCCACATGTGTTGAGCCAAACTGTTCTTTATCATGTTCATTTCCCTCCACTCAATCATTAATGGACTCAAATCATGTGAGGGATTCCCAGCAAGTAACTACTTGTTCACGTGCACAGCCCTGCCATGGCTTGAGGCAACCTGTGCTACCTCAACCACCACCAATCATGAGAGGCACTTCTGCGTCTTTAGCCAAAGAGCAAAAAATGAGGAGTGACCTTCAAGGGTTGGTTTTGACACTTGGAGGGCCTGCAAGTGGCAACCATGCTTGA 1890 0.455 MGSLVAETAKKKAMWLYPKVLGYNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDVNKMDWSKLATTGEKPGPRDSHSAVLVGHRMIVFGGTNGFKKVNDTHILDLVTKEWVRPNCEGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHILDRRTMRWTSPAVKGDLPVPRDSHSTLAIGNKLIVYGGDCGDQYQGDVNMLDMDTMTWSRLKIQGSSPGVRAGHTAVSIGTKGYIIGGVGDKRYYNDIWVFDICTCSWTQLDIRGPPPQGRFSHTAVVADMDIVIYGGCGEDERPLNELLVLQLGAEHPNGDHNISMCKVFGTYWNQEKRTIPGGADTNSTTPRTGNNMEVLGKWAYEVVSDKGQPCHFDFGTSQQKRRRIAVAKVWDVESEQEEHSLSLSQHSSPSQSDHEQTPRQKGNVSVLDSQRYHWFKQMNKGPSNCQLDNVSSNNTVLKNITQRSLHLMEHQPKQEQYVHVDQDRKGARHTKHLIGAEVRGKVDGAFDSGLLMTAAVNGRVFRGVLFAPGAGVFSTCVEPNCSLSCSFPSTQSLMDSNHVRDSQQVTTCSRAQPCHGLRQPVLPQPPPIMRGTSASLAKEQKMRSDLQGLVLTLGGPASGNHA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1794 629 Gene3D - 14 120 IPR015915 GO:0005515
Ssu7g1794 629 SUPERFAMILY Kelch motif 20 221 IPR015915 GO:0005515
Ssu7g1794 629 PANTHER KELCH REPEAT DOMAIN 1 627 - -
Ssu7g1794 629 Gene3D - 121 363 IPR015915 GO:0005515
Ssu7g1794 629 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 129 414 IPR011047 -
Ssu7g1794 629 MobiDBLite consensus disorder prediction 404 431 - -
Ssu7g1794 629 PANTHER OS01G0300900 PROTEIN 1 627 - -
Ssu7g1794 629 MobiDBLite consensus disorder prediction 408 431 - -
Ssu7g1794 629 Pfam Galactose oxidase, central domain 37 85 - -
Ssu7g1794 629 Pfam Galactose oxidase, central domain 139 189 - -
Ssu7g1794 629 Pfam Galactose oxidase, central domain 87 135 - -
Ssu7g1794 629 Pfam Galactose oxidase, central domain 231 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1794 Ssu-Chr7 36458777 36462691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1794 15 494 Acyl Lipid Metabolism Gene Families AT3G05420 27.075 7.37e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1794 K20285 - gmx:100787222 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1794 7 36458777 36462691 Ssu7g1794 7 36458777 36462691 ECH
Ssu4g0440 4 7179281 7182697 Ssu7g1794 7 36458777 36462691 PCT