Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1771 ATGAGGACAGGGTCTTTGATTTTTTCCTTATTGCAAGTACCCAGATGCAGAATACACAGCTTAGCTAGTAAAGGGGGAGAAGCATTACACGTTTTTAGTAAGACTTATGGAAACAATTCTAGCATCAGGCTACTTGGTTCTAGAATTTATGGGCTTGAGGGAGGACTCAGTGCTAAGTGGATTCAAAGACTTATAGCTACAAGAACAGAAGGAAGTAAACAAACCACTTGTGACACCAAATCAAAAAGTACCAAGCATGAAATTTTGGGGGAGAAAATTTTAACCAGTGCTACAGTGAATGTAAATAAAACACAGCTAGATCAGTTCCAGAAAATTCAGTGCCCTGAAGTACAAGAGATTGCtcagtataaaaacttatcTGACCTAGTCACTGTTATTGTTTTTGATCTTGAGACTACTGGGTATAGCAAAGTAAATGAACGGATCATTGAGATTGCACTTCGAGATCTCCAGGGTGGTGAGAACAGCACTTTCCAAACTCTTGTAAATCCTCAATGCCCTGTTCCTAATTCACGTATTCATGGAATTGCTGCCAATATGGTGAACAGACCTGATGTTCCAAGGATGGAAGACTTGATTCCCATATTGTTGCAGTACATTAAAAGCCGTCAGAAACATGGAGGATATGTGTTATGGGTTGCTCATAATGCTCGCACTTTTGATGTACCTTTCCTCATTCATGAGTTCATCCGTTGTTCTACAGAGATTCCTCTTAATTGGCTGTTTTTGGACACCCTTCCTTTGGCACGTGAACTGATGAAGTCTGGTGGAACAAACCTTTCTTCAGCATCCCTTGATGCCCTTCGTGAGTTCTACAGAGTTAAAGTGGATGGATCAGCTCACAGAGCCATGGTAGATGTGAACACATTGTCCCAGATACTTTGCATGTTGACCTCCGATCTGAAGTTGACTTTATCTAGCCTCGTCAAAAAATCATTCAACATATCAGATTTGATGAACGCTAGGAAAACGAAGAAGAATTCACACTAG 1011 0.4006 MRTGSLIFSLLQVPRCRIHSLASKGGEALHVFSKTYGNNSSIRLLGSRIYGLEGGLSAKWIQRLIATRTEGSKQTTCDTKSKSTKHEILGEKILTSATVNVNKTQLDQFQKIQCPEVQEIAQYKNLSDLVTVIVFDLETTGYSKVNERIIEIALRDLQGGENSTFQTLVNPQCPVPNSRIHGIAANMVNRPDVPRMEDLIPILLQYIKSRQKHGGYVLWVAHNARTFDVPFLIHEFIRCSTEIPLNWLFLDTLPLARELMKSGGTNLSSASLDALREFYRVKVDGSAHRAMVDVNTLSQILCMLTSDLKLTLSSLVKKSFNISDLMNARKTKKNSH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1771 336 Pfam Exonuclease 133 300 IPR013520 -
Ssu7g1771 336 Gene3D - 130 321 IPR036397 GO:0003676
Ssu7g1771 336 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 335 - -
Ssu7g1771 336 CDD DEDDh 133 301 - -
Ssu7g1771 336 SMART exoiiiendus 131 310 IPR013520 -
Ssu7g1771 336 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 335 IPR040393 GO:0008408
Ssu7g1771 336 SUPERFAMILY Ribonuclease H-like 128 311 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1771 Ssu-Chr7 36183968 36186029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1771 - - gmx:100807138 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0419 4 6818991 6822089 Ssu7g1771 7 36183968 36186029 PCT