Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1720 ATGGGTATGGCAGTGCAAGCCAGGTTTGGGGCATGGAACCCAATTCGAATAGCCCAATGTTCCGGCGATCGTTTCAAATTCAATGAGGGAGTGAATGGAGAGCGGTCTCCAGCGGAGGGATTTGCACCATTAGCCACGAAATTTCAGAGGCGGCTTCTTGTGGGCGTTGGGTCAGCTTCACTTGTGGCTGTGGGTGCAAACTTTGGTGGCATCACCAGTTTTCTTCTGGGTTTGTCACCACAGAGTGGCCGTAATCTGAAGCTGGACGTGCTTTATCCCATTGGCGGCTACAGCCGTTGCTTTGACACAAAGGAAGGATTCGAATTCATATACCCAGCAAATTGGGTCGGAGATCAGACGCTGCTGTATCGAGCTgctaagaaaagagaaatggaaCGATCATTGGATCCTCCTCCTCTGAATGTACGTCGGCGTTCTAACATCAATGAACCGGTTGTTGCATTTGGTCCCCCCGGTTCCACTGGCGAACTCAATGTTAGTGTGATTGTTTCACCTGTTGCTCCAGACTTCTCGATTGAAGCATTTGGAGGGCCAGATGAGGTGGGTGAAGCCGTGATTCGAAGCATAACAGGATCAGGGCAACGCCCTGAAGTGAAGGGCACATTGATAAAATCAAGTTTGAGGGAGGATTCCGTTAGAAATGTCAAATACTACGAACTGGAGTTCAGAGTTGAGAGCCCCTCGTTTAGGCGACACAATGTTTCAGTATGCTGCGCTCGTGGTGGTAggctttttactttaaatgctCAGGCACCTGAATCAGAGTGGCCAGGATTGAAGTCAGATTTCTATAGGATTGCTAATTCATTTAGCCTCACGACTTAG 846 0.4716 MGMAVQARFGAWNPIRIAQCSGDRFKFNEGVNGERSPAEGFAPLATKFQRRLLVGVGSASLVAVGANFGGITSFLLGLSPQSGRNLKLDVLYPIGGYSRCFDTKEGFEFIYPANWVGDQTLLYRAAKKREMERSLDPPPLNVRRRSNINEPVVAFGPPGSTGELNVSVIVSPVAPDFSIEAFGGPDEVGEAVIRSITGSGQRPEVKGTLIKSSLREDSVRNVKYYELEFRVESPSFRRHNVSVCCARGGRLFTLNAQAPESEWPGLKSDFYRIANSFSLTT 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1720 281 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTIC 29 280 - -
Ssu7g1720 281 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 93 279 - -
Ssu7g1720 281 PANTHER - 29 280 - -
Ssu7g1720 281 SUPERFAMILY Mog1p/PsbP-like 98 279 IPR016123 -
Ssu7g1720 281 Pfam PsbP 99 278 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1720 - - gmx:100801831 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1720 7 35534030 35535294 Ssu7g1720 7 35534030 35535294 ECH
Ssu4g0720 4 11204540 11205661 Ssu7g1720 7 35534030 35535294 PCT