Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0843 ATGGCGGACACGGATTCCTTCGTCGACAAGATAGAAGAGAAGTTCCACGGCCACGACTCCGATTCCGATTCCTATTCCGATTCCGACGACGACCACAACAACAAGAGGCCGCCGGCGAAGGCCGCCGGATCCAACGTATACCGCCTCTTCGGCCGCGATCAGCCCGTCCACAAGGTCTTGGGCGGCGGAAAACCTGCTGATATTTTGCTATGGAGGAACAAGAGATGCACTGCAATTGTACTTGGTGCTGGCACTgccttttggtttttctttgaGTTGATGGAATACCACCTGATAACTTTGCTTTGCCATTTATTGATTGTGTCTCTGGCGGCACTTTTCTTGTGGTCCAATGCATCTGTCTTTATCCACAAGTCTCCACTGCACATCCCGCATGTAGCAATTCCTGAGGATTGCGTTCTTGAGGTTGCTTCTGCTTTAAGAATTGAAATTAACCGAGCCTTCGTTCTTTTGCGGGAAATTGGAACTGGACGAGATTTAAAGAAGTTCCTTGGCGTTGTTGCTGGATTGTGGGTTATCTCGGTTATTGGGAGTTGGTTCAACTTCTTGACCTTGTTTTACCTACTCTTCGTGTCACTGTTCACATTGCCACTGCTGTATGAGAAATATGAAGACCAGGTTGATGCATTAGCTGAGAAGGCAATGATTCAGATCAAAAAGCAATATGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCGGGCTTGAAAAAGGATTAG 747 0.4605 MADTDSFVDKIEEKFHGHDSDSDSYSDSDDDHNNKRPPAKAAGSNVYRLFGRDQPVHKVLGGGKPADILLWRNKRCTAIVLGAGTAFWFFFELMEYHLITLLCHLLIVSLAALFLWSNASVFIHKSPLHIPHVAIPEDCVLEVASALRIEINRAFVLLREIGTGRDLKKFLGVVAGLWVISVIGSWFNFLTLFYLLFVSLFTLPLLYEKYEDQVDALAEKAMIQIKKQYAVFDAKVLSQIPIAGLKKD 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0843 248 ProSiteProfiles Reticulon domain profile. 65 248 IPR003388 -
Ssu7g0843 248 PANTHER RETICULON-LIKE PROTEIN 2 246 - -
Ssu7g0843 248 MobiDBLite consensus disorder prediction 13 37 - -
Ssu7g0843 248 PANTHER RETICULON 2 246 IPR045064 GO:0009617
Ssu7g0843 248 Pfam Reticulon 66 221 IPR003388 -
Ssu7g0843 248 MobiDBLite consensus disorder prediction 13 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0843 Ssu-Chr7 16962881 16965279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0843 - K20721 gmx:100790190 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2868 4 73417845 73419780 Ssu7g0843 7 16962881 16965279 ECH
Ssu7g0843 7 16962881 16965279 Ssu7g0843 7 16962881 16965279 ECH