Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0745 ATGAAAACCCCAGAGGCAGAGCAACCCGACATGATGATCACCAACCCGTTGATCCAAAAGGGCAAGGGCGTCACAACAGCCGAGGAAGAAAAGGACCCAACAACAATGCAAACCCAGGTGTCCAAAGAAGTCATTTCCATAGCCAAAATAGCTCTCCCCATGATCCTCACGGGTCTCTTACTATACTGCCGCTCGATGATCTCCATGCTCTTCCTCGGCCACCTCGGAGAGCTTGCCTTGGCCGGCGGCTCCCTCGCCGTGGGCTTCGCCAACATCACGGGCTACTCAATCCTCTCCGGCCTCGCCGTCGGAATGGAACCCATCTGCGGACAAGCCTTCGGCGCCAAAAAATTCACCCTGCTCGGCCTCTGCCTACAGAGAACCGTTCTCCTGCTCCTCTTCACCTCTATTCCAATCTCTCTCCTTTGGCTCTACATGAAGCACATCCTTCTCTTGTGCGGCCAGGACGAGGCCATAGCCGCACAAGCCCAATCGTATCTTCTCTACTCCGTCCCCGACCTCTTAACGCAATCTTTTTTACACCCGTTACGAATTTACCTTAGAAGCCAATCCATCACTCTGCCTCTCACCCTTTGCGCCACTTTTTCAATCCTCCTCCACATCCCCATCAACTACCTTCTCGTTTCCCACCTCAGTTGGGGACTCAAAGGCGTGGCTCTCGCCGGGGTGTGGACTAACCTCAACCTCGTAGCTTCCCTGGTTCTCTACATAGTCTTCTCCGGCACACATGAAAAAACGTGGGGAGGTTTCTCTCTCGAGTGCTTCACGCAGTGGAAATCGCTCCTCAATCTGGCCATTCCGAGCTGCGTTTCGGTGTGCTTGGAATGGTGGTGGTATGAGATCATGATTTTGTTATGCGGGTTGTTGGTAAATCCCAGAGCAACGGTAGCCTCCATGGGGATTTTGATCCAGACAACTTCTTTGCTCTACGTTTTCCCGTCGTCGATAAGCTTCAGCGTGTCCACAAGAGTCGGCAACAAGCTCGGCGCGCAAAAGCCCTCGAAGGCGAAACTCTCGGCCGTCGTGGGCCTCTCTTGCAGCTTCGTGTTAGGCGTCTTGGCTTTGGTTTTCACCATTCTGGTTAGGAACATTTGGGCCAGCATGTTCACGCGGGACAAGGAGATAATAACTCTGACCTCGTTGGTGTTGCCGATTATAGGACTTTGCGAACTCGGGAACTGTCCTCAGACAACGGGGTGCGGGGTGCTAAGAGGCACGGCGAGGCCAAAAGTCGGTGCTAACATTAACTTAGGTTGTTTCTACCTCGTGGGAATGCCTGTGGCGGTCTGGCTTGGTTTCTTTGCTGGGTTTGATTTTCAAGGCCTGTGGCTTGGGTTACTTGCGCTCAGGGGTCTTGTGCAGTGA 1386 0.5346 MKTPEAEQPDMMITNPLIQKGKGVTTAEEEKDPTTMQTQVSKEVISIAKIALPMILTGLLLYCRSMISMLFLGHLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAFGAKKFTLLGLCLQRTVLLLLFTSIPISLLWLYMKHILLLCGQDEAIAAQAQSYLLYSVPDLLTQSFLHPLRIYLRSQSITLPLTLCATFSILLHIPINYLLVSHLSWGLKGVALAGVWTNLNLVASLVLYIVFSGTHEKTWGGFSLECFTQWKSLLNLAIPSCVSVCLEWWWYEIMILLCGLLVNPRATVASMGILIQTTSLLYVFPSSISFSVSTRVGNKLGAQKPSKAKLSAVVGLSCSFVLGVLALVFTILVRNIWASMFTRDKEIITLTSLVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVAVWLGFFAGFDFQGLWLGLLALRGLVQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0745 461 PANTHER PROTEIN DETOXIFICATION 29 459 - -
Ssu7g0745 461 TIGRFAM matE: MATE efflux family protein 53 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ssu7g0745 461 CDD MATE_eukaryotic 43 455 IPR045069 GO:0042910|GO:1990961
Ssu7g0745 461 PANTHER MULTIDRUG RESISTANCE PROTEIN 29 459 - -
Ssu7g0745 461 Pfam MatE 53 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ssu7g0745 461 Pfam MatE 274 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0745 Ssu-Chr7 14983417 14984802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0745 K03327 - gmx:100777255 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0745 7 14983417 14984802 Ssu2g2825 2 89271977 89273608 ECH
Ssu7g0745 7 14983417 14984802 Ssu7g0745 7 14983417 14984802 ECH