LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu7g0543	ATGAGGCTGAACGGGGAAATCTCAAgcggagaagaagaagaggagaaacAAGCGGGAACGACGACGTTTTCGGCGCAGAAAGTGGTGGTTGGTTACGCCTTGACGTCGAAGAAGAAAAAGAGCTTTCTGCAGCCAAGTTTCACCAGCCTCGCACGGAACAAGGGGATATACTTTGTCGCTGTTGATCTAAACAAGCCACTACCAGAACAAGGTCCTTTTGATATTATCTTGCATAAGGTGTCAGGGGAGGACTGGCGTGAGATTATTGAGgatTATAGGCAAAAACATCCAGAGGTAACTGTCCTTGATCCTCCAGATGCAATCCAACACTTACACAATCGCCAATCCATGCTGCAACATGTGGTGGATCTGAACTTATCTGATTGTCATGGAAAGGTTGGTATTCCACGTCAGCTAGTTATCACTAAAGAGAAAGACCCCTCTACTATCCCTTATGAAGTCACTAAAGCAGGGATGAAGTTGCCATTAGTTGCAAAACCACTAGTTGTGGATGGCAGTGCAAAGTCACATGAACTATTTCTTGCTTATGATGAATTCTCTCTTTCAGAGCTTGAACCTCCGCTGGTTCTACAAGAGTTTGTCAATCATGATGGTCTTCTCTTTAAGATTTACATTGTTGGGGAAACCATAAAGGTTGTGAGGCGTTTCTCTCTTCCTAATATCGGTAAATGTGAGCTATCAAAAGTTGCAGGTGTATTCCGTTTCCCTAGAGTTTCATGTGCTGCAGCTTCTGCAGATGATGCTGATCTAGATCCTAATATTGCTGAACATCCACCAAGACCTTTATTGGAGAGGCTTGCGAGGGAGCTTCGCCATAGATTGGGACTCTGCTTGTTCAACATAGATATGATTCGGGAATATGGAACCAAGGATGTGTTTTATGTCATTGACATCAACTACTTTCCTGGGTATGGAAAAATGCCAGACTATGAGCACGTATTTACAGATTTTCTACTTAGCCTAGTGCAGAGCAAGTACAAGAAGAAACTTACCACCTAA	1020	0.4216	MRLNGEISSGEEEEEKQAGTTTFSAQKVVVGYALTSKKKKSFLQPSFTSLARNKGIYFVAVDLNKPLPEQGPFDIILHKVSGEDWREIIEDYRQKHPEVTVLDPPDAIQHLHNRQSMLQHVVDLNLSDCHGKVGIPRQLVITKEKDPSTIPYEVTKAGMKLPLVAKPLVVDGSAKSHELFLAYDEFSLSELEPPLVLQEFVNHDGLLFKIYIVGETIKVVRRFSLPNIGKCELSKVAGVFRFPRVSCAAASADDADLDPNIAEHPPRPLLERLARELRHRLGLCLFNIDMIREYGTKDVFYVIDINYFPGYGKMPDYEHVFTDFLLSLVQSKYKKKLTT	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu7g0543	339	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain	130	326	IPR040464	-
	Ssu7g0543	339	MobiDBLite	consensus disorder prediction	1	20	-	-
	Ssu7g0543	339	PIRSF	ITPK	9	339	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Ssu7g0543	339	Gene3D	-	104	310	-	-
	Ssu7g0543	339	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain	29	108	IPR041429	-
	Ssu7g0543	339	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	1	336	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Ssu7g0543	339	MobiDBLite	consensus disorder prediction	1	18	-	-
	Ssu7g0543	339	SUPERFAMILY	Glutathione synthetase ATP-binding domain-like	104	315	-	-
	Ssu7g0543	339	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2	1	336	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu7g0543	Ssu-Chr7	9939171	9944517	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu7g0543	K00913		-	gmx:100779381	586.26

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu2g2704	2	87275193	87276815	Ssu7g0543	7	9939171	9944517	PCT